Roseibium porphyridii: K1718_19110
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Entry
K1718_19110 CDS
T09906
Name
(GenBank) class I tRNA ligase family protein
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
rpop
Roseibium porphyridii
Pathway
rpop00450
Selenocompound metabolism
rpop00970
Aminoacyl-tRNA biosynthesis
rpop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
K1718_19110
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
K1718_19110
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rpop01007
]
K1718_19110
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpop03016
]
K1718_19110
Enzymes [BR:
rpop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
K1718_19110
Amino acid related enzymes [BR:
rpop01007
]
Aminoacyl-tRNA synthetase
Class I (U)
K1718_19110
Transfer RNA biogenesis [BR:
rpop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
K1718_19110
Prokaryotic type
Other AARSs
K1718_19110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1f
Spectrin_2
Motif
Other DBs
NCBI-ProteinID:
WFE88262
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All DBs
Position
4130521..4132041
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AA seq
506 aa
AA seq
DB search
MKSYITTPIYYVNGSPHIGHAFTSVMADILKRNREALGYELMLSTGVDEHGQKNQEAAGD
LGMPVEAFLDMRCKEFRDVFDKLDVRYDYFVRTSREGHKAAVGGMEQSIFDKGLIVKKNY
TGTYCKGCEEFKKESDLTEDGQCPLHPTMKVEHTEETNYFLKMEPFREQLLKHIADNPDF
VQPEAFRNELKQMLSDPLEDLCISRPKSRVTLGVDLPFDTEFVTYVWFDALANYLTNIDW
PDTKYATWWAECEHLIGKDILKPHGVYWPIMLMAAGLPLPKKLSVHSHWVGAGGVKMSKS
IGNVVDPIEVIEKLGVDALRWYLARHMRADSDSQISVELITQSYNSELGNKIGNLLSRAA
KFSKARFDGTLPVPGPLSAQDEAIRKAVVDATAGLGEWIDLADIPARMQSIITVADEMNN
YFAEQAPWELIKNDDTRERCQTVIYVTLDSLRVVMEALQQVIPESASRALNMLNAPDAAQ
PWKPELDKLLGGGDLGEIETLFPRVQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagctacatcaccactccgatctactacgtcaatggatccccgcatatcggtcac
gccttcacttccgtgatggctgacatcttgaagcggaaccgtgaggcgctggggtatgag
ctgatgctgtccaccggcgttgacgagcatggccaaaaaaaccaggaagctgctggcgac
ctcggaatgcctgtcgaggcgtttctcgacatgcgctgcaaggaattccgcgacgttttc
gacaaactggacgtgcggtacgactattttgtccggacaagtcgtgaggggcacaaggcg
gccgttggcggcatggagcagtcgatcttcgacaaggggctgatcgtcaagaagaattac
accggcacctactgcaagggctgcgaagagttcaaaaaggaatccgatctcactgaagac
ggtcagtgcccactgcatccgaccatgaaggtggagcatacggaagagaccaactacttc
ttgaaaatggagccgtttcgcgagcaactgctgaagcatattgccgacaacccggacttc
gtacagcctgaagcgttccgaaacgaattgaaacagatgctgtcagatccccttgaggat
ctttgcatctcgcgcccaaaatcccgcgtaacccttggtgtcgacctgccgttcgatacc
gagttcgtcacctatgtctggttcgacgcgcttgccaactatctgaccaacattgactgg
ccagacaccaagtatgcaacctggtgggcagaatgcgaacatctgatcggcaaggacatt
ttgaaacctcacggggtttactggccgatcatgctgatggccgcaggtcttccgctgcca
aagaaactctcggtgcacagccactgggtgggtgctggcggcgtgaaaatgtcaaagtcc
atcggcaatgtcgttgatccgatcgaagtgatcgagaaactcggcgttgatgccctgcgc
tggtatcttgcgcgccatatgcgcgcagacagcgacagccagatttcggtcgagctgatc
acgcaaagctataacagtgaactgggcaacaagatcggcaaccttctgtctcgcgctgca
aagttctccaaggcgcggttcgatggcactttgcctgttccggggccgctgtcggctcag
gacgaagccattcgcaaagcggtcgtggatgcaacagcgggattgggtgaatggatcgat
ctcgcggacataccggcgagaatgcagtcgatcatcactgtcgcggatgaaatgaacaac
tatttcgccgagcaggctccctgggaactcatcaagaatgatgacaccagagaacgttgc
caaacggtgatttatgtgacgctcgacagcctgcgggtcgtgatggaagccctgcaacag
gtcattccagaatccgccagtcgcgcgctgaacatgctcaacgcacctgacgcggctcag
ccctggaagccggaactggacaagcttctcggcggtggtgaccttggcgagattgagacc
ctgttcccacgcgtacaataa
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