Roseibium porphyridii: K1718_20550
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Entry
K1718_20550 CDS
T09906
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
rpop
Roseibium porphyridii
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpop03009
]
K1718_20550
Enzymes [BR:
rpop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
K1718_20550
Ribosome biogenesis [BR:
rpop03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
K1718_20550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WFE88534
UniProt:
A0ABY8F196
LinkDB
All DBs
Position
complement(4442998..4443696)
Genome browser
AA seq
232 aa
AA seq
DB search
MRLVKLLANLGYGSRKEMQLAIRNGWVTDKAGNALKVDSRVDHEDLLFDDEPLDPAQGVV
LLMNKPLGYTCSTKDQGRLVYDLLPDRFRMRKPVLSTIGRLDKETSGALLFTDDGTFLHK
VISPKSNVPKIYDVVLDRPLKGDEAGIFASGEMMLESEEKPLKPALLDIVDETHARLTLH
EGRYHQVRRMFASVGNHVNELKRSAIGGLGLDCVEEGSWQVLSDARKAQIFN
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgtaaagcttctcgccaatctgggctacggcagccgcaaggaaatgcagctc
gcgatccggaacggatgggtgacagacaaggcaggcaatgctctgaaggttgacagccgc
gtcgaccacgaagacctcctgtttgatgatgaacctttggatccggcacagggcgttgtt
ctgctcatgaacaagccgcttggctacacttgctcgaccaaggatcagggcaggctcgtt
tatgacctgctgcctgatcggttccggatgcgcaaacccgtcttgtcgacgatagggcgc
ctggacaaggaaacatcgggcgccttgctctttaccgacgacgggacattcctgcacaag
gtgatttcaccgaaatcgaatgtgccgaagatttatgacgtggttctggaccgccccttg
aaaggcgatgaagccggcattttcgcatccggtgaaatgatgctggagagtgaggaaaaa
ccactgaaaccggctctgctagatatcgtggatgaaacgcacgcccgcctcaccttgcac
gaagggcggtatcatcaagtgcgccgtatgtttgcaagcgttggcaatcacgtcaatgaa
ctgaagcgcagcgcaataggtggtttgggcttggattgtgttgaagaaggcagttggcag
gtgctttccgatgcgcgcaaggctcagattttcaactag
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