Roseibium porphyridii: K1718_21355
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Entry
K1718_21355 CDS
T09906
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rpop
Roseibium porphyridii
Pathway
rpop00260
Glycine, serine and threonine metabolism
rpop00460
Cyanoamino acid metabolism
rpop00630
Glyoxylate and dicarboxylate metabolism
rpop00670
One carbon pool by folate
rpop00680
Methane metabolism
rpop01100
Metabolic pathways
rpop01110
Biosynthesis of secondary metabolites
rpop01120
Microbial metabolism in diverse environments
rpop01200
Carbon metabolism
rpop01230
Biosynthesis of amino acids
rpop01240
Biosynthesis of cofactors
rpop04981
Folate transport and metabolism
Module
rpop_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K1718_21355
09102 Energy metabolism
00680 Methane metabolism
K1718_21355
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K1718_21355
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
K1718_21355
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
K1718_21355
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
K1718_21355
Enzymes [BR:
rpop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
K1718_21355
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
SelA
Motif
Other DBs
NCBI-ProteinID:
WFE88683
UniProt:
A0ABY8F7M2
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All DBs
Position
4639420..4640742
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AA seq
440 aa
AA seq
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MSARDTHPWLPEEVVSRIDGITDASRKLTSQQIVSRIENLADENRTIHEKDCFNLNPATN
VMNPRAEALLASGLGSRPSLGYPGDKYEMGLEAIEEIEVLASALACEVFRSSHAEIRVAS
GAMANLYAFMATTRPGDVIIAPPASVGGHVTHHQPGCAGLYGLEIHTAPVDADGYTIDID
GLRQLAREKQPNLITIGMSLNLFPHPVADIREIADEVGALVLFDAAHQCGMIAGGVFADP
LSEGAHLMTMSTYKSLGGPAGGLIVTNEADLAQRLDAIAFPGMTANFDVAKSAALAITLL
DWREFGTAYARKVTDTAQALAAALAEEGMPVFKTGNGFTASHQFALEAAPFGGGQTASKK
LRKAGFLACGIGLPVANVAGDMNGLRIGTPELVRWGMDDTHMPQLAHLIAEALRSNDPKA
MAGRVAEWRGSFGALHYVLT
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcacgtgacacacatccctggttgcccgaagaagtcgtttcacggatcgacggg
atcacggacgcttccaggaaactgacttcgcagcaaatcgtctcacgcatcgaaaacttg
gccgacgaaaaccggacaatccacgaaaaggattgtttcaatctcaatcctgcaaccaat
gtcatgaacccacgggccgaagctctgttggcaagcggtctcggttccaggccgtcgctt
ggatatccaggtgacaaatatgagatgggtcttgaagcaatagaagagatagaggtgctg
gctagcgcactggcctgcgaagttttcagatcgagccatgccgaaatccgcgtcgcttcc
ggggccatggccaatctttacgccttcatggccaccacgcgtccgggcgatgtcattatc
gctccaccggcatcggtcggtggccacgtgacccaccaccaaccgggatgcgccggtctc
tacggtctcgaaattcatacagccccggttgatgcagacggctacacaatcgacattgac
ggtttgaggcagcttgcccgggaaaagcaaccgaacctcattaccatcgggatgagcctg
aacctctttccacatcccgttgcggacattcgggagatagcagacgaagtcggtgccctg
gtcctgttcgatgcagcacatcaatgtggaatgattgccggtggtgtatttgccgatccg
ctttctgaaggggctcacctcatgactatgagcacctacaaaagccttggtggccctgcc
ggtggactgatcgtcacgaacgaggcggacctggctcagaggcttgatgcaatcgcgttc
ccgggcatgacggccaatttcgacgtggcaaagtctgcagcgctggcgattacattgctg
gactggcgcgaattcgggactgcctatgcccggaaagtgacggacaccgcgcaggcgctt
gccgcagcgcttgccgaagaaggcatgccggtcttcaagaccggcaatggctttaccgcg
tcacatcaattcgcacttgaggcggctccttttggtggcgggcagactgcatccaagaaa
cttcgcaaggccggctttctggcgtgcggcatcggattgcctgtcgcgaatgttgccggt
gacatgaacggcctgagaatcggcacacccgaactggtgcgctggggcatggacgatacc
catatgccgcagctggcgcacctgatagccgaggctctgcgatcaaacgatccgaaagca
atggccgggcgggtggcggaatggcgtggcagtttcggagctttgcactatgtgctgacg
taa
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