Roseibium porphyridii: K1718_22985
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Entry
K1718_22985 CDS
T09906
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10912
two-component system, repressor protein LuxO
Organism
rpop
Roseibium porphyridii
Pathway
rpop02020
Two-component system
rpop02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K1718_22985
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K1718_22985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rpop02022
]
K1718_22985
Two-component system [BR:
rpop02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
K1718_22985
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
Response_reg
AAA_5
AAA
AAA_16
AAA_19
Mg_chelatase
HTH_29
AAA_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WFE88995
UniProt:
A0ABY8F555
LinkDB
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Position
4999479..5000966
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AA seq
495 aa
AA seq
DB search
MGSNEGTELPVIVRVLDASASEAARTAAVCAKLAHACSDPILYTDSASCLQDLADKSTDI
LIIDLETIGGDEALEAYAVRCPKSVIMAVSAKGSVSRAVSAMRAGAHDFLTKPFSLDALA
SKVSFQLEQRRPAIKSAPAPIEPMPAPAVIERPVPVERVNIQDIEVTGHSRLIGASAKMR
DVHEQISRMAPSQAPVFITGESGTGKELCANAVHDLSERKSNRFVTLNCAAIPRDLIESE
IFGYMRGAFTGATDNRAGAAEQADGGTLFLDEIGEMDLLLQSKLLRFLQTGTFQRLGDTQ
TRKVDARIICATNRDPVAEISAGRFREDLYYRLHVLPIHLPPLRERRDDILPLAAAFLDR
YSGEERRSFKGFDADAEARIIAYAWPGNVRQLENTIRQIVVMNDGVAVTFDMLPIVIRDQ
SSRPNAIIDLSRERARVPVPSRPFGAIEPLWAQERRIIEDALDAFDGNIAMAAAALEISP
STIYRKRQSWTARSL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggggagtaacgagggcactgagttgcctgtaattgtacgtgtcctggacgcatcagct
tcggaagctgcacgcacggcagcggtctgtgccaaactggctcatgcctgctccgatcct
atcctttatacggattctgcctcctgccttcaggatctcgcagacaaatcaactgacatc
ctgattattgaccttgagacaattggcggtgacgaagctcttgaggcttatgccgttcgc
tgcccaaaatcggtgataatggctgtctcggcaaaagggtctgtgtcgcgcgctgtcagc
gctatgcgcgcgggcgctcatgactttctgacaaagcccttctcgcttgacgcactggcg
tcgaaggtctccttccaactggaacaacgccgtccggccatcaagagcgcaccggctccg
atcgagccgatgccggctcccgccgttattgaaagacctgtcccagttgaacgggttaac
atacaagacattgaagttaccggccattcgcggctgatcggtgcttctgctaaaatgcgg
gatgtacacgaacagatcagccgaatggccccttctcaagcgccagtgttcatcaccggt
gagtccggtaccggcaaagaactttgcgccaacgctgtccacgatctttccgagcgcaag
tcaaaccggttcgtgaccctcaattgcgcagcgatcccacgtgatctcatcgagagcgaa
atcttcggctatatgcgtggggcgttcaccggcgccaccgacaatcgggccggcgcggcg
gaacaggcagacggcggaaccctgtttctcgatgaaatcggcgagatggatctgctcttg
caaagcaaattgctccggttcctgcaaacgggcacattccagagactgggcgacacccag
acgcgaaaggtcgatgcgcggatcatctgcgccaccaatcgcgatcccgttgccgaaatt
tcagctggccggttccgcgaagacctctactacagacttcacgtgctgccgatccatttg
ccccctttgcgcgagagacgagacgacatcctgccattggctgctgcctttcttgaccgg
tattcgggtgaagagcggcgatccttcaaagggttcgacgcagatgcggaagcacgcatc
atcgcctatgcctggccgggcaatgttcgtcagctggaaaacaccattcggcagattgtc
gtgatgaacgacggagtagcggtcacgttcgatatgcttccgatagtgatccgcgaccaa
agcagccgcccgaacgccattattgatctgtccagggaaagagctcgcgtgccggttccg
agccggcctttcggcgcaatcgagccgctttgggctcaggagcggcggatcatcgaagat
gctctggacgcctttgacggcaacatcgcaatggccgcagccgccctcgagatcagccct
tcaactatctaccgcaaacgccagtcctggacggcgcgcagtctttaa
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