Roseibium porphyridii: K1718_23000
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Entry
K1718_23000 CDS
T09906
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rpop
Roseibium porphyridii
Pathway
rpop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1718_23000 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpop03019
]
K1718_23000 (groL)
03110 Chaperones and folding catalysts [BR:
rpop03110
]
K1718_23000 (groL)
03029 Mitochondrial biogenesis [BR:
rpop03029
]
K1718_23000 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpop04147
]
K1718_23000 (groL)
Enzymes [BR:
rpop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
K1718_23000 (groL)
Messenger RNA biogenesis [BR:
rpop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
K1718_23000 (groL)
Chaperones and folding catalysts [BR:
rpop03110
]
Heat shock proteins
HSP60 / Chaperonin
K1718_23000 (groL)
Mitochondrial biogenesis [BR:
rpop03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
K1718_23000 (groL)
Exosome [BR:
rpop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K1718_23000 (groL)
Exosomal proteins of other body fluids (saliva and urine)
K1718_23000 (groL)
Exosomal proteins of breast cancer cells
K1718_23000 (groL)
Exosomal proteins of colorectal cancer cells
K1718_23000 (groL)
Exosomal proteins of bladder cancer cells
K1718_23000 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SHOCT-like_DUF2089-C
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
WFE88998
LinkDB
All DBs
Position
5002293..5003936
Genome browser
AA seq
547 aa
AA seq
DB search
MSAKEVKFSSDARERMLKGVDTLANAVKVTLGPKGRNVVLDKAFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVKEGAKAVAAGMNPMDLKRGV
DLAAAEAVKSLEASSKTITTSEEVAQVGTISANGDEQVGQDIAEAMQKVGNEGVITVEEA
KSLETELEVVEGMQFDRGYLSPYFVTNADKMLADLEKPYILLHEKKLSNLQAMLPILEAV
VQSSRPLIIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLENVSLDMLGTAEKVAITKETTTIVDGAGSKEDIDGRVGQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVDDALNATRAAVEEGIVPGGGTALL
RAKKAVEALSSDNSDIEAGIKIVLRALEAPLRQIVENAGVEGSIVVGKIQENGDDTFGFN
AQTEQFVNMIEAGIIDPTKVVRTALQDAASVAGLLITTEAMVAELPKKEAAPAMPGGDMG
GMGGMGF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctaaagaagtaaaattctcctccgacgcccgtgagcgcatgctcaaaggcgtg
gacaccctggcaaacgctgtaaaggtaaccctcggcccgaaaggccgtaacgttgttctc
gacaaagccttcggcgctccgcgtatcaccaaagacggtgtttccgttgccaaggaaatc
gaactggaagacaagttcgaaaacatgggcgcacagatggtgcgtgaagttgcttccaaa
accaacgacatcgctggtgacggcacaacaaccgcgacggttctggctcaagccatcgtc
aaggaaggcgcaaaagcagttgctgccggcatgaatccgatggatctgaagcgcggcgtc
gatcttgctgctgctgaagctgtcaagtctctggaagcttcttccaagaccatcacgact
tctgaagaagttgcacaggtcggcaccatttccgccaatggcgacgagcaggtcggtcag
gacattgccgaagccatgcagaaagtcggcaacgaaggtgttatcaccgtcgaggaagcc
aagtctctggaaaccgagctcgaagtcgttgaaggcatgcagttcgaccgtggctacctg
tctccttacttcgtcaccaacgctgacaaaatgctggctgacctggagaagccttacatc
ctgctgcacgagaaaaaactctccaacctgcaggccatgctgccgatcctggaagctgtt
gttcagtcttcccgtccgctcatcatcattgctgaagatgttgaaggcgaagcgctggca
accctcgttgtcaacaaactgcgtggcggcctgaaaatcgctgctgtcaaggctccgggc
ttcggcgaccgccgtaaggccatgctggaagacatcgcgatcctcaccggcggcaccgtg
atctccgaagatctcggcatcaagctggagaacgtctccctcgacatgctcggcacagcc
gagaaagttgccatcaccaaggaaaccaccaccatcgttgacggtgccggttccaaggaa
gacattgacggccgcgttggtcagatcaaggcacagatcgaggaaaccacttccgattac
gaccgtgaaaagctccaggagcgcctggccaagcttgctggcggtgttgcagttatccgc
gttggcggtgcaaccgaaatcgaagtgaaagagaaaaaagaccgcgttgacgatgctctg
aacgcgacgcgtgctgctgttgaagaaggcatcgtcccaggtggcggtaccgctctgctg
cgcgccaagaaagctgtcgaagctctttcttccgacaattccgacatcgaagccggcatc
aagatcgttctgcgcgctctggaagctccgcttcgtcagatcgttgaaaacgctggtgtc
gaaggctccatcgttgttggcaagatccaggaaaatggcgatgacacattcggcttcaac
gctcagaccgaacaattcgtcaacatgatcgaagccggcatcatcgacccgaccaaagtt
gtccgtactgctctgcaggacgcagcttccgtcgccggcctgctcatcacaaccgaagcc
atggttgctgagctgccgaagaaagaagcagcaccggcaatgccgggtggcgacatgggc
ggcatgggcggcatgggcttctaa
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