Roseibium porphyridii: K1718_23260
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Entry
K1718_23260 CDS
T09906
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rpop
Roseibium porphyridii
Pathway
rpop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K1718_23260 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpop03400
]
K1718_23260 (xseA)
Enzymes [BR:
rpop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
K1718_23260 (xseA)
DNA repair and recombination proteins [BR:
rpop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
K1718_23260 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
WFE89046
UniProt:
A0ABY8F1F9
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All DBs
Position
5056338..5057903
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AA seq
521 aa
AA seq
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MSEQSSNVAEFSVSEISFSIKRTMEDAFGYVRVRGELGRISRPGSGHIYLDLKDDRAVLS
GVIWRGVASKLKIQPEQGLEVIATGKITTFPGQSKYQMVIDALEPAGAGALMALLEERKK
KLAAEGLFAEERKKALPPLPKVIGVVTSPTGAVIRDILHRISDRFPLHVVVWPVRVQGET
SGAEVANGIRGFNALSADGPIPRPDLLIVARGGGSIEDLWGFNEEAVVRAAADSQIPLIS
AVGHETDWTLIDLAADLRAPTPTGAAEIAVPVKAELMAMVDDRARRLNSGLVRFVTSRRT
ELRAASAALPAPQDLLALPRQKFDTLANSLERALIVSTKSHRTHLENLSGRLSPFLLSRQ
TSKARQDLTQISGRQQRALQVAVSQKRQAYSGASGRLSPARLAQQITLGNERLNGFSERL
DRAYLARVREEKTRLDGLQKLLKSLSYKDVLARGYAVVRDESGQPVRSAAELAQGAALSI
ELADGAVEAMVMSDSGTSKPKAKTKKPATSKSKPADQGSLF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaacagtcctccaacgttgccgaattttcggtttccgaaatctcgttctccatc
aaacggacaatggaagatgcgttcggttatgtgcgcgtacggggagagctcggacgtatc
tcgcggccagggtctgggcatatttaccttgacctcaaggacgaccgggccgttttgtcc
ggcgtgatttggcgcggcgttgcctccaaactgaagatccagcccgaacaaggtctggaa
gtcatcgcgacaggcaagatcacgaccttccccggtcagtccaagtaccagatggtcatc
gatgcgctcgagcctgctggcgctggtgctttgatggcactgcttgaagagcggaaaaag
aaacttgccgctgaagggctctttgctgaagaacgaaaaaaagcgctgcctccgctgcca
aaggtcattggcgtggtcacgtcaccgactggcgccgtcattcgggatattctgcatcgc
atcagcgacaggtttccgctgcatgttgtcgtttggcctgttcgcgttcagggtgaaacg
tctggcgcggaggtcgccaatggcattcgcggtttcaacgctttatcagcggacggcccg
atccccagaccggatcttctgatcgtcgcccgcggtggcggcagtattgaagatctttgg
ggcttcaatgaagaagcagtggtgcgcgcagctgcggacagtcagatacccctgatatct
gctgtcggccatgaaaccgactggaccctgatcgacctggccgcagacctacgagcaccc
acgccaaccggtgctgcggagatcgctgttccggtgaaggccgagctcatggcgatggtg
gatgacagggcgcgtcgactgaattctgggcttgtccgctttgtcacgtcgcgccggacg
gaacttcgggccgcgagcgctgctttgccggcgcctcaagacctgctggccttgccgcgc
cagaaattcgacacgctggcgaacagcctggagcgggcgttgatcgtcagcaccaaaagc
catcgcacacatcttgaaaatctgtcgggccgtttgtcgcccttccttttgtcccggcag
acttcaaaggcaagacaggatcttacccagatcagcggtcggcagcagcgtgcgcttcag
gttgccgtcagtcagaaacggcaggcctattccggcgcctcgggacgattgtcgcctgcc
cggctcgctcaacagatcacgctcggcaacgaacggctgaacggcttttcagaacggctt
gaccgggcttatcttgcacgggttcgagaagaaaaaacgcgtctcgacggtttgcagaag
ctgctgaaatcgctctcttacaaagatgttctggcgcgaggatatgcagtcgtgcgtgat
gaaagcgggcaaccagtccggtctgcggccgagcttgctcaaggagcagcactctcaatc
gaactggctgatggtgcggtcgaagcaatggtcatgagtgacagtggaacgagcaaaccc
aaggccaaaacgaaaaaaccggcaacatccaaaagcaagcctgctgaccaaggaagctta
ttttag
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