Roseibium porphyridii: K1718_23640
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Entry
K1718_23640 CDS
T09906
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
rpop
Roseibium porphyridii
Pathway
rpop00520
Amino sugar and nucleotide sugar metabolism
rpop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
K1718_23640
Enzymes [BR:
rpop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
K1718_23640
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
Motif
Other DBs
NCBI-ProteinID:
WFE89117
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All DBs
Position
complement(5140659..5142272)
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AA seq
537 aa
AA seq
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MSNAPQDIQNPILPGFNPDPSICRVGNDYYIATSTFEWFPGVQIHHSRDLKNWRLVMRPL
TRPEQLDMRGNPDSCGIWAPCLTYADGLFWLVYTDVKRKDGSFKDAHNYIVTAPDIEGPW
SDPVYTNSSGFDPSLFHDEDGRKWFLNMIWDHRVGHNSFAGIALQEYDPVKQALIGPIQN
IFKGTPLALTEGPHLYKRDGWYYLLTAEGGTAYDHAVTLARSRQIGGPYDVHPEQHVVTA
RFDPDNPIQRAGHGDFVETQTGETYLVHLMGRPRLGQDRCQMGRETAIQKCVWGDDGWLR
LEAGGVAPQSSVPGPNLPEHVFPEEIARHEFDSPELPDVFQWLRTPYPDRLFSLRERPGH
LRLFGRESVGSWFEQAFVARRQTHYDYEAETLVDFQPETFQQTAGLIAYYGQLQFFYLAV
THDEVKGRVLTILSSPGDDPEGHIKAPLQESVSLPESGPVALKVTVEEMALRFWYRTSGS
DWDRIGPAFDATLLSDEAAGRGAHGNFTGAFVGMHAMDTSGQAKTADFDYFSYRNLV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgcacctcaggatattcaaaaccccatcctgcccggattcaatcctgatccg
tccatttgccgggtgggaaacgactactacatcgcaacgtcaaccttcgaatggtttccg
ggcgttcaaatccatcattccagggatttgaaaaactggcggctcgttatgcgtccgttg
acccggcccgagcaattggacatgcgcggcaatccggactcctgcggtatctgggcacct
tgcctcacctatgccgatggtcttttctggcttgtttacacagatgtgaaacgcaaagac
ggatccttcaaggatgcgcacaattatattgttaccgctcctgacatcgagggtccctgg
tcagatcctgtctacacaaattcctcaggctttgatccgtcgctattccatgatgaagac
ggacgcaaatggtttttgaacatgatctgggaccatcgggtgggccacaattccttcgcc
ggcatcgcgcttcaggaatacgatcccgtcaaacaggcattgatcggacccatccagaat
attttcaagggcactccgctcgccctgaccgaaggcccgcatctttataagcgtgatggt
tggtactacctgctgaccgcagagggagggactgcctatgatcacgcggtgacactagcc
agatcccggcaaattggtgggccatatgacgtccatcctgaacaacatgttgtcacggca
cggttcgatccggacaacccgatccaaagggctgggcacggtgattttgtcgaaacccag
actggtgaaacctatctggtgcatttgatggggcgaccacgtcttggtcaggatcgttgt
cagatgggtcgagagaccgcgatccagaaatgcgtctggggcgatgatggatggttgcgg
ctggaagctggcggtgttgcgccacaatcgagcgtaccaggaccgaacctgccggaacat
gtattcccagaggaaatcgctcgacatgaattcgacagtcctgaactcccggatgttttt
cagtggctacgcacaccctatcctgaccgtttgttttcgctcagggagcggccgggtcat
ttgaggctctttggacgcgaatccgttggcagctggttcgaacaggcgtttgttgccagg
cggcagacacactacgactacgaggctgaaactcttgtcgattttcaaccggaaacgttt
caacagacagccggactgatcgcatactacggtcaattgcagtttttctatcttgctgta
acgcatgacgaggttaaggggcgcgttctgacaattctgagctctcccggtgacgatccg
gagggacatatcaaagcgcctctgcaagaatccgtttcgttgccggaaagcggtcccgtt
gcattgaaagtcacagttgaggaaatggctctgcgattctggtatcggacatccggaagt
gactgggaccggatcggtccggcatttgatgcaactctgttgtccgacgaagctgcgggc
cgcggtgctcatggcaatttcaccggtgcttttgtcggaatgcacgcgatggatacgtcc
ggtcaggccaaaacggcagactttgactatttcagctatcgaaaccttgtctga
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