Roseibium porphyridii: K1718_24070
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Entry
K1718_24070 CDS
T09906
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rpop
Roseibium porphyridii
Pathway
rpop00300
Lysine biosynthesis
rpop01100
Metabolic pathways
rpop01120
Microbial metabolism in diverse environments
rpop01230
Biosynthesis of amino acids
Module
rpop_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K1718_24070 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpop01002
]
K1718_24070 (dapE)
Enzymes [BR:
rpop01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
K1718_24070 (dapE)
Peptidases and inhibitors [BR:
rpop01002
]
Metallo peptidases
Family M20
K1718_24070 (dapE)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
WFE89199
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All DBs
Position
complement(5229072..5230247)
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AA seq
391 aa
AA seq
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MPSNAVAIAQDLIRCPSVTPAEGGALTTLENLLTSAGFEVTRVTFQDEDTPDVENLFATI
GSGKPHFVFAGHTDVVPAGAENDWSHGPFAGTIHDGVLFGRGAVDMKGGIAAFAAAAIDL
VQELGKDFGGTISLLITGDEEGPAVNGTVKLLEWAKAEGHEFDACIVGEPTNPAKLGDAI
KVGRRGSLSGIVTVSGTQGHAAYPHLADNPIPGLVQLLAALNALELDKGNERFQPSNLEV
VTVDVGNTAFNVIPARAEARFNIRYNDEWTLSTLQAKVRETLESVDLGSLNLELVFKRDA
SESFLTRDEKLIADLSDAVREETGRVPELSTGGGTSDARFIKNYCPVVEFGLVGQTMHKV
DECVAVDDLDQLTTIYKRFLVSYFAQSAGAD
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgccttccaacgccgtcgccattgcccaggatctgatccgttgtccttcggtcacgcca
gctgagggaggggccctgacgacacttgaaaatctgctgacgtcggccgggtttgaagtc
actcgggtcacgtttcaggatgaggatacgccggacgtcgaaaaccttttcgcaacgatc
ggttccgggaaaccgcatttcgtgtttgccgggcatacggatgttgtgcccgccggtgcg
gaaaatgactggagccacgggccatttgccggaactatacatgacggcgttttgttcgga
cgtggcgctgtcgatatgaagggtggcatcgctgcttttgcagccgccgcgattgatctg
gtgcaggaactcggcaaggacttcggtggaacgatttcattgctgatcacaggcgatgaa
gaaggtcctgcggttaacggcaccgtcaagttgttggaatgggccaaggctgaaggtcat
gaatttgatgcctgcattgtcggcgagcccaccaatcctgccaaactgggagatgccatc
aaggttggtcgccgcggctctctttcagggatcgtgaccgtgtccggaacccaggggcac
gccgcctatccgcatcttgccgacaatcccatacccggccttgtgcagctgcttgctgcg
ctcaatgcacttgagctggacaagggcaacgaaagatttcagccctccaatctcgaagtc
gtgacggtagatgttggcaacacggctttcaatgtaattccggctcgggccgaggcacgc
ttcaacattcgctacaatgacgagtggacgctgtcgacgctacaggccaaggtccgggag
acgctggaaagtgtggatctcgggtccttgaacctggagcttgtgttcaagcgagatgcc
agcgaatccttcctgacgcgggacgaaaaactgattgctgacctcagcgatgcggtccgg
gaagaaacggggcgtgttccggaactttccacgggtggcggaacatccgatgcacggttc
atcaagaattattgcccggtggttgaattcggccttgtcggtcagacaatgcacaaggtg
gacgagtgcgttgcagtcgatgaccttgaccagctgacgacgatctataaacgatttctg
gtcagctattttgcacaatctgcgggagcggactga
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