Roseibium porphyridii: K1718_25140
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Entry
K1718_25140 CDS
T09906
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rpop
Roseibium porphyridii
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpop03016
]
K1718_25140
Enzymes [BR:
rpop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
K1718_25140
Transfer RNA biogenesis [BR:
rpop03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K1718_25140
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
CNOT1_HEAT
Motif
Other DBs
NCBI-ProteinID:
WFE89400
LinkDB
All DBs
Position
complement(5459568..5460188)
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AA seq
206 aa
AA seq
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MTIRYHKGDLPDLSAYEKASAVAVDSETLGLNPHRDRLCVVQLSPGDGSADVVQIARGQA
DAPNLAALMTDPSKPKIFHFARFDVAVLKHYLDIRVSPVWCTKIASKLVRTYTDRHGLKD
ITRELLGVELSKQQQSSDWAAETLSDAQLAYAASDVLYLHDLRDRLQAMLKREEREHIAK
ACFDFLPTRAELDLKGWEDNDIFAHS
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgctaccacaagggagatctccctgatctgagcgcttacgaaaaggcaagt
gcagtagcggtcgattccgaaacgcttggcctcaatcctcatcgtgacaggctctgtgtc
gttcagctttcacctggcgacgggtccgcagatgtggttcagatcgcgcgcggtcaggca
gatgcgcccaaccttgccgcattgatgacagatccatcgaaaccgaagatttttcatttt
gccagatttgatgttgccgtcttgaagcactatctggatatccgtgtgtcacctgtctgg
tgcaccaaaattgcgtcgaagctggtgcgcacatacacagatcgtcatggtttgaaggac
attacccgcgagctgcttggagtggaactttccaaacagcagcagagttccgattgggcg
gccgagactttgtctgatgcacaattggcctatgcggcgtcagatgtgctctatcttcat
gatctgagggatcggctccaggcgatgctcaagcgggaagaacgtgaacacatcgccaaa
gcatgctttgactttttgccgacgcgtgccgaacttgatcttaagggatgggaagacaat
gacatctttgcgcattcctga
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