Roseibium porphyridii: K1718_26390
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Entry
K1718_26390 CDS
T09906
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rpop
Roseibium porphyridii
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpop03032
]
K1718_26390 (ihfB)
03036 Chromosome and associated proteins [BR:
rpop03036
]
K1718_26390 (ihfB)
03400 DNA repair and recombination proteins [BR:
rpop03400
]
K1718_26390 (ihfB)
DNA replication proteins [BR:
rpop03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K1718_26390 (ihfB)
Chromosome and associated proteins [BR:
rpop03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
K1718_26390 (ihfB)
DNA repair and recombination proteins [BR:
rpop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
K1718_26390 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_bac_1
XPC-binding
Motif
Other DBs
NCBI-ProteinID:
WFE89641
UniProt:
A0ABY8F2N0
LinkDB
All DBs
Position
5716023..5716322
Genome browser
AA seq
99 aa
AA seq
DB search
MIKSELVQHIAEQNPHLYQRDVENIVNAILDEVTEALMRGDRVELRGFGAFSVKNRPARI
GRNPRTGQKVEVDEKFVPFFKTGKEMRIRLNDGVDHGDD
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatctgagcttgtacagcatatcgccgagcagaacccgcatctgtatcagcgc
gatgtcgaaaacatcgtcaatgccatcttggacgaggtcacggaagctttgatgcgtggt
gaccgtgtggagctgcgtggcttcggagcgttctccgtcaagaaccgccctgcccgtatc
ggccgcaatccgcgcaccggccagaaggtggaagttgacgagaaatttgttcccttcttc
aaaaccggcaaagaaatgcgtatacgattgaacgatggtgtggatcacggcgacgactga
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integrated database retrieval system
