Roseibium porphyridii: K1718_26790
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Entry
K1718_26790 CDS
T09906
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rpop
Roseibium porphyridii
Pathway
rpop03030
DNA replication
rpop03430
Mismatch repair
rpop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K1718_26790
03430 Mismatch repair
K1718_26790
03440 Homologous recombination
K1718_26790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpop03032
]
K1718_26790
03400 DNA repair and recombination proteins [BR:
rpop03400
]
K1718_26790
Enzymes [BR:
rpop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K1718_26790
DNA replication proteins [BR:
rpop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K1718_26790
DNA repair and recombination proteins [BR:
rpop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K1718_26790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
RuvB_N
AAA_5
AAA_30
AAA_14
AAA_18
AAA_19
TsaE
AAA_assoc_2
Rad17
TraI_hel_assoc_N
DUF815
SRP54
AAA_24
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WFE89718
UniProt:
A0ABY8FAQ6
LinkDB
All DBs
Position
complement(5801904..5803847)
Genome browser
AA seq
647 aa
AA seq
DB search
MDETGFPEEGASEAPGLISDSSVVQPATQDGAYRVLARKYRPKTFEDLVGQEPMVQTLEN
AFDTGRIAQAWMLTGVRGVGKTTTARILARGLNYEVPGVADRPTVKLDQEGTHCKAIMEG
RHVDVIEMDAASHTGINDIREIIDASRYRPATARYKVYIIDEVHMLSNAAFNGLLKTLEE
PPEHVKFIFATTEIRKVPITVLSRCQRFDLRRIDQSKLIGLLKRISDAEGIQISDEALML
IARAGEGSARDSLSLLDQAMAHGGGAIEAGDLRQMLGLADRARVIDLFGHLMSGDIEKAL
AELQAQYDVGADPAIVLTDLADFTHLVTRMKVAPKAADEASVTEAERARGREFAEKISVR
LLSRAWQILLKGVQEVQAASKPLAAADMVLVRLAYAVDLPDPGDLMAQIKNGQNPLAGAA
APRGTAPSGGSGDPGGGGGTAMAVAASHGSGPAGSGPTMQARPVQALGRPQLAAIEGGMP
KSDTQPMAAPEPQVQAEPAYSLKNLHDCVALASEKRDIPMKVAIQRQMRLVKFEPGKIEI
QPTEDAPADIAGEFGRKLLEWTGQRWFVVVSRNQGRPTIHEEQEANQQQLLSDAKSHPTV
AALLSAFPGAKVVDVKVQVSEEDEAALADPMVSDPLLGEALGDDEDD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggatgagacaggttttccggaagagggagccagcgaagctcccggtctgatcagcgac
agcagtgtggtgcaacccgccacccaggatggcgcttatcgtgtgcttgcgcgaaagtat
cgacccaagacctttgaggatctggttggtcaggagccaatggttcaaacgctggaaaac
gcgtttgatacaggccggattgcccaagcctggatgctgacaggtgtgcggggggtcgga
aaaacgacaacagcgcgcattctggcgcgggggctgaactatgaggtgccgggtgtcgcc
gaccggccgacagtcaagctcgatcaggaaggcacccattgcaaggcgattatggaagga
cgccatgtagatgtgatcgagatggatgccgcgtcccataccggcatcaacgacattcgc
gaaatcattgacgcctcccgataccgtccagccacagcgcgttacaaagtctacatcatc
gacgaagtgcacatgctgtccaatgcggctttcaacggtctgctcaagacccttgaagaa
ccgccggagcacgtgaagttcatttttgcgaccaccgagattcgcaaagttccgatcacg
gttctctcccggtgtcagcgctttgatttgcgccggatcgatcagtcgaaacttattggc
ctcctgaagcggatctccgacgcggaaggcattcagatctcggatgaggcattgatgctg
atcgccagagcaggtgaggggtctgctcgcgattcgctatctttgctggatcaggcgatg
gcgcatggtgggggcgcaatcgaagccggtgatctgcggcagatgcttggtctggccgac
cgggcaagagttattgacctcttcgggcacttgatgagcggcgacattgaaaaggcgctt
gcagaacttcaagcgcagtatgatgtcggtgcggacccggccatcgtcctgacggatctg
gctgattttacccatctggtgacgcgcatgaaggtggcgccaaaggccgcggacgaagct
tcggtgacagaagcagagcgtgcgcgtggccgtgaatttgctgaaaagatttccgtgcgg
ctattgtcccgcgcctggcagatcctgctgaaaggcgtgcaggaagtacaggcggcgtcg
aagccattggcagccgcagacatggttcttgtacgattggcctatgctgtcgacctgccg
gatccaggcgacctgatggcgcagatcaagaatgggcaaaatccgctcgcgggtgcggcc
gctcccagaggcacagctccttcgggaggtagcggcgacccgggcggcggtggtggaacg
gcgatggccgttgcagcctcacatggttcaggacctgccggaagcgggcccaccatgcag
gcaaggccggtacaagccttggggcggcctcaacttgccgcaatcgaaggcggtatgccg
aagtccgacacgcagccaatggctgcccccgagccacaggtacaggcagagcctgcttac
agcctgaaaaacctgcatgactgtgtcgcgctggcgtcggaaaaacgcgatattccgatg
aaggtcgccatccagcgtcagatgcggttggtcaagttcgaaccgggcaagatcgaaatt
caacccacagaagatgcacctgccgatatcgcgggcgaattcggtcgaaagttgctggaa
tggactggccagagatggttcgtggttgtctcccgcaatcagggccgtccaaccattcat
gaagagcaggaagccaaccagcaacaactgctgtcggacgccaagtctcatccaaccgtc
gcggccttgctatcagcttttcccggggccaaggtcgtcgacgtgaaggtacaggtatcg
gaagaggacgaagctgctctggcagatccgatggtttcagacccccttttaggcgaggcg
ctcggcgatgacgaagacgattga
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