Roseibium porphyridii: K1718_26935
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Entry
K1718_26935 CDS
T09906
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rpop
Roseibium porphyridii
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpop03016
]
K1718_26935 (truB)
Enzymes [BR:
rpop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K1718_26935 (truB)
Transfer RNA biogenesis [BR:
rpop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K1718_26935 (truB)
Prokaryotic type
K1718_26935 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WFE89745
LinkDB
All DBs
Position
complement(5832507..5833451)
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AA seq
314 aa
AA seq
DB search
MARQKQVKRKKNAINGWLVLDKPYGITSNEALGKIKRIFSPQKVGHAGTLDPRASGLLPV
AFGEATKTVPFVMDGRKVYRFEVTWGAETDTDDTEGEVIASSDVRPTEDAIAAVLSEFTG
TIMQVPPKFSAIKVAGERAYDLAREGEAVALEARPIDVHRLDLVSCRDDNRAIFEAECGK
GTYVRALARDLGRRLGTRGHVTELRRLLVGPFGEGDLIKFDEILEAAEDLQDSEDVQELV
AEFVLPVRDAMDELVEVSVSLDDAAKIRKGMAIILRGRDAPLNTDVAFASHADVPVAIGT
IEKGRFQPTRVFHL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcacggcaaaaacaggtcaaaagaaaaaagaatgccatcaatggctggctggtcctg
gacaagccctacggcatcacctccaacgaggcgctgggtaagataaaacgcatcttctcg
ccgcaaaaagtgggtcacgcaggcactttggatccaagggcttccggtctgttgcctgtt
gcgtttggtgaagccacgaagacggttccatttgtgatggatggccgcaaggtctatcga
tttgaagtgacctggggcgctgaaaccgacactgacgataccgaaggcgaggttattgcc
tcatctgacgttcggccgaccgaggatgcgattgctgctgtccttagcgaatttaccgga
acgatcatgcaggtcccacccaaattctcggcaatcaaggttgccggtgaacgggcctat
gatctggcgcgtgaaggtgaggctgtcgcgttggaggcccgaccgattgatgttcaccgt
ctcgatcttgtcagctgccgggatgataaccgcgcaattttcgaggctgagtgtggcaaa
ggaacctatgtacgcgcgctcgcaagggatcttggccgcaggctgggcacgcgtgggcat
gtcacggaattgcgccggttgcttgtcggcccctttggggaaggcgatctgatcaagttc
gacgagatcctggaagcggccgaggatttgcaggacagcgaagatgttcaggaacttgtc
gctgaatttgttttgccggtccgcgacgcaatggatgaactggttgaggtctcggtctca
ctcgacgatgcagcgaagatccgtaaaggaatggcaattatcctgcgcggccgggacgct
ccgctgaatacggacgttgcctttgccagccacgccgacgtgcctgtcgcgatcggcacg
attgaaaaaggccgttttcagccgacccgtgtgtttcatttgtga
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