Candidatus Rhabdochlamydia porcellionis: RHAB15C_0000008
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Entry
RHAB15C_0000008 CDS
T07448
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rpor
Candidatus Rhabdochlamydia porcellionis
Pathway
rpor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHAB15C_0000008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpor03400
]
RHAB15C_0000008
Enzymes [BR:
rpor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RHAB15C_0000008
DNA repair and recombination proteins [BR:
rpor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RHAB15C_0000008
Prokaryotic type
RHAB15C_0000008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QZA58140
LinkDB
All DBs
Position
8184..8858
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AA seq
224 aa
AA seq
DB search
MKLAASWHEVLKEELTKPYIANLKRFLAQEKAENKVIYPPEELIFNAFLHTPFDKVKVII
MGQDPYHGPGQAHGLSFSVPCGIPQPPSLKNIFKEQSQDVNINLPKEGCLSSWAKQGVLL
LNATLTVRANEPKSHYGRGWEIFTDAVVAKLVERKDPLVFVLWGKSAQEKIGAVLEEKTT
SHVVLTAAHPSPYSAQGFFGCRHFSQINEALKKWDKEPIHWQLS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagcagctagttggcatgaagtattaaaggaagaacttactaagccttatatt
gcaaatcttaaaagatttttggcgcaagaaaaagctgagaataaagtcatctaccctcct
gaagagttgatattcaatgcctttttacataccccatttgataaagtaaaagttataatt
atgggacaagatccctatcacggaccaggacaggcacatggcttgagttttagtgttcct
tgtggaataccccaacccccttctttaaaaaatatatttaaagagcaaagccaagatgta
aatatcaatttacctaaagaaggttgtttatcttcgtgggctaagcaaggggtattattg
ctcaatgcaacgcttactgtacgcgcaaatgagccaaaatcgcattatgggcgtggatgg
gagatctttaccgatgcggtagttgctaaattagtagaaaggaaagatcctttggtattt
gttctttggggaaaatccgcccaggaaaagataggagctgttttagaagaaaaaacaact
tctcatgttgtattgacagctgcgcacccttctccttattcagctcaagggttttttggt
tgtcgtcatttttctcaaatcaacgaagctttaaaaaaatgggataaagaacctattcat
tggcaattatcttaa
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