Candidatus Rhabdochlamydia porcellionis: RHAB15C_0000029
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Entry
RHAB15C_0000029 CDS
T07448
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
rpor
Candidatus Rhabdochlamydia porcellionis
Pathway
rpor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RHAB15C_0000029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpor03400
]
RHAB15C_0000029
Enzymes [BR:
rpor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RHAB15C_0000029
DNA repair and recombination proteins [BR:
rpor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RHAB15C_0000029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PDDEXK_1
AAA_12
AAA_25
Creb_binding
Motif
Other DBs
NCBI-ProteinID:
QZA58159
UniProt:
A0ABX8YY63
LinkDB
All DBs
Position
complement(33588..36926)
Genome browser
AA seq
1112 aa
AA seq
DB search
MKEFNILDRNLSIFGPHFLEASAGTGKTFAIEHLVARLILETKDPIAMEQILIVTFTREA
TRELKRRIRQNLQCLYKDLREKNADLDYVKAILEKGNAALLQAQERIESALIFFDNTSIY
TLHSFCYKLIQEFAFETQNGFNLNDPDEHAYLSTLQYAVKQVLRTEMKSPLYSPNQVHFL
LSQYKSNPKQLLNHLIQVTKEDRKLNPFPSFLDLHQQFLCVLPALPSVCSSKFVKEVQQL
SAIYKQMTDKNYIKEAEIWGKILETKTCALEEFDMLLTKNSFLEKITESNRKIRAKTIFF
TYTDLFKELQNHLLPLLQQAKNPKKTFLRLCALCQEKSQLLLQKADLYFPDTIVSRVHQA
LIEHPELKEQIQNKFQAIIIDEFQDTDKTQWQLFHQLFTPKTQTFCLVGDPKQSIYAFRK
ADLYTYLSAAKIIGKDHLRYLNTNYRSSSSLIEVLNKFFTKTKNWMPIPALQSYLDVHSV
HPIDLNFPYVTAPMHLFVAKATYHKKAKWPTISTENQQLFAFIAQEIKQLQVHYHTPKSK
IAILVKDRYQAARVVSFLNGQGISSNFKRGIALTQSNAYFGFKEILTAVLDPTDSSKIKI
ALGTALIGWTKQQLLQDWKHPCFIQAKLSFQTLKTIWEEKGFSCFFYSLLHTYFDPDISL
LQKLLSSKQTELYLDLTMLAKILIEQEMQGYPGISLLRALNDMQDTLKESCFATSSQQEE
DSVLVMTIFMSKGLEFDAVFALSLSSRQKTPDYITIKDQLIPCNLEDPKCQLALEETDAE
KMRQLYVALTRAKYHLYIPVVLDQLQTPIPLAEASPIELFLSNWLFQETNWQKTYDLIPT
ITQDSIASIASELQPNVTYSICAQMEPLSTFSKTVNPVLIKPEEILLNISSEHWLSFSSI
AQLEKKQEKQTSIFMEEKTLCSMPLGAETGNIIHHILEQCFKLCYHCPIDSHKISLLIHS
FLQNTLLKDWQQAIEQTILSILEEPLLIDQISLFLSDLTSDQMQQEMEFVFPIQEGMMKG
FIDLCFEHQGKYYLLDWKTNYLGSDETDYSEEALVIEMNRCNYFLQASIYATALKKHIQL
FESRPFADLFGGAIYYFVRGKKFYHFYPTLME
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatttaatatcctcgatcgcaatctttctatattcggcccgcattttttagaa
gcttccgctggtacaggaaaaacatttgccattgaacatctagttgctaggctcattctt
gaaacaaaagaccctattgccatggagcaaattttaatagttacttttactagagaagca
acccgtgaattaaaaaggcgtattcgccaaaacctacagtgcctctataaggacctccga
gaaaaaaatgcagatctcgattatgtaaaagccattctagaaaaaggcaacgctgcactt
ttacaagcgcaagaaagaattgagtctgctttgatcttttttgacaatacttctatttat
acattgcatagcttttgctataaactgattcaagaatttgcttttgaaacccaaaatgga
ttcaatcttaatgatcctgatgaacatgcctatttatccaccttgcaatatgctgtgaag
caagttctacgcacagaaatgaaaagccctctatatagccccaaccaagtgcatttttta
ctttcccaatacaaatctaatcctaagcaactgctaaatcatttaatccaagtaaccaaa
gaggatagaaaactaaacccttttccttccttcctagatttgcaccagcaatttctctgt
gtgctccctgcattaccttctgtgtgtagttctaagtttgtaaaagaggttcaacaatta
tctgctatttacaaacaaatgaccgataaaaactatataaaagaagctgaaatttggggg
aaaattctggaaacgaaaacttgtgccttagaagaatttgatatgctgcttacaaagaat
tcttttttagaaaaaatcaccgaatcaaaccgtaaaatacgcgctaaaacaatttttttt
acatatacagatctatttaaagagctgcaaaatcatcttttgcctcttttacaacaagcc
aaaaacccaaaaaaaactttcttaagactttgtgctttatgccaagaaaaatcccaattg
cttttacaaaaagcagatctgtacttccctgatacaatcgttagcagagttcatcaagcg
ctcattgaacatcctgaactaaaagaacagatacaaaataaatttcaagcaattatcatc
gatgaattccaagatacagataaaactcaatggcaactattccatcaactattcacacca
aaaacgcaaacattttgtcttgtaggagaccccaaacaatccatctacgcctttagaaag
gctgacttatatacgtatttatctgcagcaaaaatcataggtaaagaccacttacgttac
ttgaatacaaattatcgaagttcttcttctctcattgaagtgttaaataagttttttaca
aaaactaaaaattggatgcctatccctgcgctgcaatcttatttagatgtgcattctgtt
catcccatcgatttaaacttcccctatgtaacagctcccatgcatctatttgtagcaaaa
gccacttaccacaaaaaagccaagtggccaacaatctcaacggaaaaccaacagctattt
gccttcattgctcaagaaattaagcaattacaagttcattaccatactccaaaatctaaa
atcgctatcttagttaaagatcgttaccaagcagctagagtggtttcttttctgaacgga
caagggatttcttctaactttaaacgaggtatagctcttactcaatcaaatgcttatttt
ggctttaaagaaattttaacagctgtattagatccaacagattcaagtaaaataaaaatc
gccttgggaacagcactcattggatggacaaaacagcaattgctccaagattggaaacac
ccttgttttatccaagcaaagctaagtttccaaactcttaaaaccatttgggaagaaaaa
ggatttagctgttttttttattccctattgcatacctattttgatccagatatctctctt
ttgcaaaaacttctctcatctaagcaaacagaactctatttagatttaactatgctagcg
aaaatactcattgaacaagaaatgcaaggctacccaggaatttctctgctcagagcttta
aacgatatgcaagataccttaaaagagagttgctttgcaacctcttctcagcaagaagag
gacagtgtacttgtaatgactatttttatgagtaaaggtttagaatttgatgcagtattt
gctctttctttatcttctcgtcaaaaaactcctgactacatcacgattaaagatcaattg
attccttgtaacctagaagatcctaaatgccaacttgccttagaagaaacagatgcagaa
aaaatgcgacaattatatgttgctctcacacgtgcaaaatatcatttgtatatccctgtt
gttttagatcagctacaaacaccaataccattagcagaagcatctcccatcgaattattt
ttaagtaattggctattccaagagacgaattggcaaaaaacttatgatctgatccctaca
ataacacaagattctattgcatctattgcttctgaattgcaacccaatgtcacctattcc
atctgcgcgcagatggagcctctatcaactttttcaaaaacagtaaatcctgttctcata
aaaccagaagaaattctactaaacatctcttctgagcattggctttccttctcttccata
gcccaattagaaaaaaaacaagaaaaacaaacttctatctttatggaagaaaaaacactt
tgtagtatgccgcttggagcagaaacaggaaatatcattcaccatattttagagcagtgt
tttaaattatgctatcattgcccgatagattctcataaaatttctttattgatccattct
tttctacaaaacactctattaaaagattggcagcaagcgatcgaacaaaccattctatcc
attttagaagaacctcttctcatcgatcagatttctctttttctctctgatttgacctct
gatcaaatgcaacaagaaatggagtttgtctttcctatccaagaagggatgatgaaaggc
tttatcgatctgtgttttgaacatcaggggaaatattatctactcgattggaaaaccaat
tatctaggctctgatgagaccgattattccgaagaagctcttgtcatagaaatgaaccgc
tgtaattattttttgcaagcatctatctatgccacagctcttaaaaaacacatacagctc
tttgaatctcgcccttttgcagatctatttggaggagctatttattactttgttcgaggt
aaaaaattctatcacttttatcccacccttatggaatag
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