Candidatus Rhabdochlamydia porcellionis: RHAB15C_0000159
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Entry
RHAB15C_0000159 CDS
T07448
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rpor
Candidatus Rhabdochlamydia porcellionis
Pathway
rpor03030
DNA replication
rpor03430
Mismatch repair
rpor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHAB15C_0000159
03430 Mismatch repair
RHAB15C_0000159
03440 Homologous recombination
RHAB15C_0000159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpor03032
]
RHAB15C_0000159
03400 DNA repair and recombination proteins [BR:
rpor03400
]
RHAB15C_0000159
Enzymes [BR:
rpor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHAB15C_0000159
DNA replication proteins [BR:
rpor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHAB15C_0000159
DNA repair and recombination proteins [BR:
rpor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHAB15C_0000159
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
TNIP1_N
Motif
Other DBs
NCBI-ProteinID:
QZA58287
UniProt:
A0ABX8YYI9
LinkDB
All DBs
Position
189871..193578
Genome browser
AA seq
1235 aa
AA seq
DB search
MNWNSLHTHSQYSILNATASIESLVAKAAEYQMTALALTDQSNMYGAVDFFKACIKENIK
PIIGCELYVAPESRFDKKRHPGLPHGFPIILLAKDSQGYQNLCKLSSLAHLEGFYYTPRI
DRDLLAECAKGLICLSGPFNGILGHYIIQKDEEKTYREIAWFQQIFGSDYYFELQRHQMQ
EEDIRSDGFEKEGWLHQLYLDSINKQNTVNQKLIALSSELQIPLVATNNIHYIYRDDWNA
HEILMNVQSGEPCEIWEKDSFGSLKQRVKNPKRQVNYTHELYFKSSDLMSSLFVDIPSAI
EETHKISDKCNFSFDFKAKYYPIFTPPQLEGSSYTEEIRQEGVAAFLRQLCEEGIVKRYT
NSRLTKVSEKYPERDPLEVVKERLDYELNIILSKGMADYLLIVWDFISWAKKKYIPVGPG
RGSGAGSIILYLIEVTDIEPLRFDLFFERFINPERVSYPDIDVDICMDRRSEVIDYTVGK
YGKDKVAQIITFGTMKAKMAIKDVGRVLSVPLARVNEIAKLIPEDLNMTLSKALEIDPEL
RRIYQEDKEIKQLIDIAKKLEGSVRNTGVHAAGIIISADPLMQRIPLCSAKDSDMAITQF
SMKPVEQVGMLKIDFLGLKTLTSIQHAVDAIKQKEQKEIDWVNLNLENEKTFALLNQGKT
TGIFQLESAGMQDLARQLHIDKFEEIIAVGALYRPGPMEMIPSFINRKHGKENIEIDHLW
MEDILSETYGIMVYQEQVMQIASRLAGYSLGEGDVLRRAMGKKDKEEMFNQREKFRLGAI
KNNLSEEIAMRVFDKIEKFASYGFNKSHAAAYGYLSYVTAYLKANYPGEWMAALMTSDCD
DLSKVTKHIRESQKMDIAILPPDINESGKQFLATEKGIRFAMGAIKGVGIGVVDIILKER
LKGNYKSLFDFIQRIDTGKVGKKVMESLVEAGCFDFTKFSRAALLASVDPMFNAASKGKK
EAAKGIMSLFDLLDDSSLECTQVPQEVQELPRQVILRREYELLGVYLHEHPLDEYRTLLK
KLSCISLAELVDLKDGPCRIACIIEGVAIKVSAKNQRKFAILKISDNEERFELPIWSDLY
EQKASLMTENQLLYAIVHKETTEGQIRLQCRWLDDLTRVDEAMIQACDLAYTQAKQFKLV
KFREKNKSSTVEKKQKTMKKLKIFIDSNRAHLSHILLLKTAFRSHSGNSPVEILFTKENK
HLEVLLIEQNWGVEQCLDLENKIRSISSIDQILWE
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaactctcttcatacgcattctcaatactctattttaaatgcaactgcttct
atagaaagcttagtagcaaaagcagctgaatatcaaatgacggctttagctttgaccgat
cagagcaatatgtatggcgctgttgatttttttaaagcatgcataaaagaaaatatcaaa
cccattattggttgtgagctttatgtagctcctgaatctcgttttgataaaaaacggcat
ccagggttgcctcacggtttccctattatcttactagccaaggatagtcaagggtatcaa
aacctttgcaaattgagttctctagctcatctagaaggattttactacactcctagaata
gatcgagatcttttggcagagtgtgctaagggtctgatttgtctctcaggtcccttcaat
gggattttaggccattatattatacaaaaagatgaggaaaaaacctatcgggaaattgct
tggtttcagcaaatatttggttctgactattattttgaactgcaacgtcatcaaatgcag
gaggaagacattcgctctgatggctttgaaaaagagggttggcttcatcaattatatttg
gatagcataaataaacaaaatacggtcaaccaaaagttgatagctctttcttctgagcta
cagattcctttggttgctaccaataatattcattatatttatcgcgatgattggaatgcg
catgagatcttaatgaacgtacagtcaggggaaccgtgtgaaatctgggaaaaagactca
tttggaagccttaaacaacgagtgaaaaatccaaagaggcaagtgaattatacacatgag
ttgtattttaaaagctctgatcttatgagctctctttttgtcgatatcccttctgctata
gaagagacgcataagatctctgataaatgcaatttctcttttgattttaaagctaaatat
tatcctatttttactcctcctcaattagaaggctcttcttatacagaggagataagacaa
gagggcgtagcggcatttttgcgtcaattatgcgaggaagggattgtaaaaagatatacg
aattcaaggctaaccaaagtttctgaaaaatatccagaacgcgatcctctagaggtagtt
aaagagcgtttagactatgaattaaatattattctatctaaagggatggctgattatctt
ttaattgtttgggatttcatttcttgggcaaagaaaaaatatattccagtgggtccagga
agaggctcaggagcaggatcgattattttgtatttgattgaagtcaccgatatcgaacct
ctaagatttgatttgttctttgaaagatttataaatccagagcgagtttcttatcctgat
attgatgtagatatttgcatggatagacgatctgaggtcatcgactacacagttggtaaa
tacggtaaagacaaagtagcacaaattattacttttggcacaatgaaagctaaaatggct
attaaagacgtgggaagggttttaagcgttcctcttgctagagtcaatgagatagctaag
ttaattcctgaagatctcaatatgactctaagcaaggctttagaaatagatcctgagctt
cgcaggatttatcaagaagataaagaaatcaaacaactcatcgatattgctaaaaagctc
gaagggtctgtgcgcaatacaggagtacatgctgctggaattattattagtgcagatcct
cttatgcaaagaattcccttatgcagcgctaaagattctgatatggcaattacgcaattt
tccatgaagccggttgagcaagtaggtatgcttaaaatcgattttcttggactgaagaca
ttgacctctatccaacatgctgtcgatgcaattaagcaaaaagaacaaaaagaaattgat
tgggttaacttaaatttagaaaatgaaaaaacttttgcattgctcaatcaaggcaagaca
acaggaatatttcaattagaatcagctggcatgcaagatttagcacgtcaattacatatc
gataaatttgaagagattatagcagtgggcgcgttatatcgtccgggtcctatggagatg
attccctcttttattaatcgtaaacatggcaaagagaacattgaaatagatcatctttgg
atggaagatattctttctgaaacctatgggatcatggtttatcaagagcaggtcatgcaa
attgcaagtcgtcttgctgggtactctttaggcgaaggagatgtcttaaggcgtgcaatg
gggaaaaaagataaagaggagatgtttaaccaacgggaaaaatttcgtttaggagcaatc
aaaaataacttaagcgaagagattgctatgcgggtttttgataaaattgaaaagtttgcc
tcttacggttttaacaaatctcatgcagctgcttatggttatttaagttatgtaacagca
tatctcaaagcaaattatcccggtgagtggatggcagcgctcatgacatctgattgcgat
gacctttctaaagtgactaaacacatacgagaatcgcaaaagatggatattgctattttg
ccacccgatattaatgaatcgggtaagcaatttttagctacggaaaaagggattcgcttt
gccatgggggctattaaaggagtaggaataggagttgtcgatattattttaaaagagaga
ttaaaaggtaattataaatctttatttgattttattcagcgtattgatacaggtaaagtg
ggtaaaaaggtaatggagagtttagttgaagcaggttgctttgattttacgaaattcagt
agagctgctttgctagccagtgttgatcctatgtttaatgctgcttccaaagggaaaaaa
gaagcggcaaaaggcattatgagtcttttcgaccttctggatgattcttctcttgagtgc
acacaagtgcctcaagaagtccaagaactgccaagacaagttattctgcgaagagaatat
gaacttttaggtgtttatctacatgaacatcctttagatgaatatcgtactttattaaaa
aaactttcctgtatttctttagctgaattagtagatttaaaagacggtccttgtcgaatt
gcctgtattatagaaggggttgctattaaagtttctgcaaaaaatcaacgtaaatttgcc
attcttaaaattagtgataatgaagagcgttttgaattacctatttggtcagatctttat
gagcaaaaagcttctcttatgacagaaaaccagttattatatgcaattgttcataaagaa
accacagaagggcaaattcgtttgcagtgtcgctggctagatgatttaacacgtgtagat
gaagcaatgattcaagcctgtgatttggcttatactcaggcaaagcaatttaaacttgta
aaatttcgcgaaaaaaataaaagttctactgtagaaaagaaacaaaaaactatgaaaaaa
ttaaaaatttttattgattctaatcgagctcatttaagtcatattctgttgcttaaaacc
gcttttcgttcgcattcaggtaatagtcctgttgaaattttatttacaaaagagaacaaa
catctagaggtattgttaatagagcaaaattggggtgtagaacaatgcttggatttagaa
aataaaattcgctctatcagcagtattgatcaaatactatgggaataa
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