Candidatus Rhabdochlamydia porcellionis: RHAB15C_0000594
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Entry
RHAB15C_0000594 CDS
T07448
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rpor
Candidatus Rhabdochlamydia porcellionis
Brite
KEGG Orthology (KO) [BR:
rpor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpor03032
]
RHAB15C_0000594
03400 DNA repair and recombination proteins [BR:
rpor03400
]
RHAB15C_0000594
Enzymes [BR:
rpor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RHAB15C_0000594
DNA replication proteins [BR:
rpor03032
]
Prokaryotic type
DNA Topoisomerases
RHAB15C_0000594
DNA repair and recombination proteins [BR:
rpor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RHAB15C_0000594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
QZA58716
UniProt:
A0ABX8YZB8
LinkDB
All DBs
Position
680828..683311
Genome browser
AA seq
827 aa
AA seq
DB search
MTTMTKEEQYDASSITVLEGLQAVRERPSMYIGDTQTNGLHQLVYEVVDNSVDEALAGHC
SEISIFIHEDNSVTVQDNGRGIPVGRHVQESKKQGRDVSAIEVVMTILHAGGKFDKSTYK
VSGGLHGVGVSCVNALSEKCDVEVRQNGKIYFIQFSKGKVIHPLKQVGDSKEHGTKVTFK
PDPTIFTVLTFDHDLLLKRFRELAFLNKGLTIRFRDERQADSQELVFCYEGGVKSFVEYL
NENKTPIFSKPIYIYGSKEGVDGVVDFEVAMQWNTTYSENLYSYVNNISTRMGGTHVSGF
STALTRVLNQYIKTHNLLKSDKMTVQGDDMREGLTAVLSVKVPNPQFEGQTKQKLGNNEV
GSLVQQITGEHLAVFLEENPVIARMIVEKAILAAQARDAARRARELTLRKTALDTARLPG
KLTDCQEKDPALCELFIVEGDSAGGSAKTGRDRRFQAILPIRGKILNVEKARLEKVLQNQ
EVGAMIAAFGCGIGQGNFNLEKLRYHKIIIMTDADVDGSHIRTLLLTFFYRHMPALIESG
FVYIAQPPLFKVTRKKSSRYIHSEKDMDKYLLKLGLSDIQIQLVGHSDPLSKELLEELVK
LIRDVEVFILSIEKKSIPFREFLQVKDEAGRLPRFQVKLGEEEKLIYSEEEFVEIKLSHE
ALQKSKHAETLASIPIEEQTVEMQTFRAKGMPFVELYEKKVIDSLKTRLSQFNFTLDQYV
IADGKLFDIIDEEGKYHPMYTLKEGIEFLRQNGRKGIEIQRYKGLGEMNADQLCDTTMDP
QKRTLLHVTLPDAIAADHTFTMLMGEEVPPRRKFIEQHALSVKNLDI
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaatgaccaaagaagaacaatatgatgctagttccattaccgtcctagaagga
ttacaagcggtaagagagcgccctagcatgtatatcggtgatacacaaaccaatgggttg
catcagcttgtttacgaagtagtggataatagcgttgatgaagcgttagctggtcattgc
agtgaaatttctattttcattcatgaggataactcagtaaccgttcaagataatggaagg
ggaattcctgttggacgtcacgttcaagaatcgaaaaaacaaggccgagatgtttctgca
attgaagtagttatgactattttgcacgcaggtggtaaatttgataaaagtacctataaa
gtttcaggtggacttcatggagtaggagtttcctgtgttaatgctttatctgagaagtgt
gatgttgaagtgcgtcaaaatggcaagatttatttcattcaattttccaaaggtaaagta
attcatcctcttaaacaggtaggggatagcaaagaacacggtaccaaagtaacttttaaa
cccgatccaaccattttcaccgtattgacttttgatcacgatttactgttgaagcgtttt
cgtgaactagcttttttaaataaaggattaaccattcgctttcgtgatgaaagacaagca
gactctcaagagttggttttttgttatgaaggaggggttaaatcctttgtagaatacttg
aatgaaaataaaacacctattttctctaagccgatttatatttatggatcaaaagaaggt
gtagatggagtagttgactttgaagttgctatgcagtggaataccacttattcggagaac
ttgtactcctatgtaaataatatatcgactcgcatgggaggaacacatgttagtgggttt
tctacagctttaacgcgcgttttaaaccaatatattaagactcataatctgttaaaaagc
gataagatgacggttcaaggtgatgatatgagagaggggcttaccgctgttttatctgta
aaagtacctaatcctcagtttgaagggcaaaccaaacagaagctaggcaacaatgaagta
ggttcacttgtacaacagattacaggggagcacttggcggtatttttagaagagaatcca
gtcattgctcgcatgattgtagaaaaagctattcttgcagctcaggctcgagatgctgct
cgaagggcaagagaattaaccctgcgtaagacagctttagatacggcaagactgcctgga
aaactaaccgattgccaagaaaaagatcccgcgctttgtgaattatttattgtagaagga
gattcagcagggggatcagcaaaaacaggtagagatcgcagatttcaagccattcttccc
attcgtggaaaaattcttaacgtggaaaaagcgcgtttggaaaaagttttgcagaatcaa
gaagtaggtgcaatgattgcagcttttggttgtggaattgggcaaggtaattttaatcta
gaaaagttgcgttatcataagattattattatgacggatgctgatgttgatggctcacac
attcgtactctattgctaacttttttctatcgtcatatgcccgctttaattgaaagcggt
tttgtttatatcgcacagcctcctttatttaaagttacacgcaaaaaatccagtcgctat
attcacagtgaaaaagatatggataaatacctactaaaactaggtcttagcgatattcaa
atccagttagtcggccatagtgatccattatctaaagagttacttgaagaattagtaaaa
cttatccgcgatgtagaagtatttattctgtccattgagaaaaaaagcattccttttcgt
gaatttttacaagttaaagatgaggcaggtagacttcctcggttccaagtaaaattagga
gaggaggagaaattaatttactcagaagaggaatttgtagagattaaattgtctcatgag
gctctgcaaaaatctaaacatgctgagacgctagcctccatccctattgaggaacaaacg
gtagaaatgcaaacttttcgtgctaaaggaatgccatttgtagagttgtacgagaaaaaa
gtcattgattctttaaagacacgtctttcacagtttaattttacacttgatcaatatgtt
attgcagatggtaaattatttgatattatcgatgaagaaggtaagtaccatcctatgtat
actttaaaagaaggaattgaattcttacgacagaatggacgaaaaggaatcgaaattcaa
cgatataaaggattaggggaaatgaatgcggatcagctttgtgatacaacaatggatcct
caaaaacgaacccttcttcatgtaacgcttcctgatgctattgcagctgatcatacattt
actatgcttatgggagaagaagttcctcctagacgaaagtttatcgagcaacacgcccta
tcagttaagaatttggatatttaa
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