Candidatus Rhabdochlamydia porcellionis: RHAB15C_0000602
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Entry
RHAB15C_0000602 CDS
T07448
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rpor
Candidatus Rhabdochlamydia porcellionis
Pathway
rpor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RHAB15C_0000602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpor03400
]
RHAB15C_0000602
Enzymes [BR:
rpor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RHAB15C_0000602
DNA repair and recombination proteins [BR:
rpor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RHAB15C_0000602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Fe-ADH
SSB
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QZA58723
UniProt:
A0ABX8Z014
LinkDB
All DBs
Position
complement(691019..692425)
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AA seq
468 aa
AA seq
DB search
MEEIFTVSTLTLAIKHTLELNFFSVCIKGEISNFKAQSSGHLYFTLKDSEAQISCVLFRS
NTKFLTRLPQNGDQVIVQGELSVYPPRGNYQIIARSLNYMGIGELLIKWHQLKTKLEQLG
FFEREKKKPLPKYPKKVGVVTSATGAVIQDILQILKRRAPGLSILLNPVTVQGEIAAKEI
AQAIKDFNKHQLADVLIVGRGGGSLEDLWAFNEESVACAIYHSKIPIISAVGHETDTCIS
DFVADQRAPTPSAAAELVTVGSAQQITYLHTSYMQLKNAITSHLKRCTEKVHFVSNHPFI
KNPHAFLEPHFQRVDNYVTDTNRSFTQIIQKKRWQLSLLTSKLHHLRPSYQLQEIKQKIA
AIDTLLQQTILHKLYEYKSKLSSLFCYKKIDLRQNQLIYEKKTSLTKVIALLQAADPKYL
LTKGYGILFHEKNDSVILSTKEVIPNQQVRLMLQDGQLGLTIHTIKSL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatctttaccgtttctacgctcaccttggctattaaacacactttagaatta
aattttttttctgtgtgtattaagggggaaattagcaatttcaaagctcaatcctccggg
catttgtatttcactttgaaggattcagaagcacaaatttcttgtgttttatttcgttct
aacactaaatttttaacccgtcttccgcaaaatggagatcaggtgatcgttcaaggagag
ctgagcgtatatcctcctagaggtaattatcagattattgctcgtagtttaaattacatg
ggaataggcgagcttttgataaaatggcaccaactgaaaaccaagttagagcagttgggc
ttttttgaaagggaaaagaaaaagcctttgcctaaatatcctaagaaggttggagttgtt
acctctgcaacaggagctgttattcaagatattttacaaatactcaaaagaagagctcct
ggtttatctatcctgttaaatcctgtcactgtacaaggagagatagctgcaaaagagatt
gctcaagctattaaagactttaataaacaccagctagccgatgttctgattgtaggaaga
ggcggtggtagtttagaggatctttgggccttcaatgaagagagcgtagcttgcgctatt
taccattctaagattccgatcatctctgcagttggccatgaaacagatacctgtatctct
gattttgtagcagatcaaagagctcctactccatctgctgcggctgaacttgtaacagtt
gggagcgcccaacagattacttatcttcacacatcctatatgcaattaaagaatgcaata
actagccatcttaagagatgtacagagaaagtgcattttgtttcaaatcatcctttcatt
aaaaaccctcatgcttttttggaaccccactttcaacgtgtagataattatgtaacagat
acgaaccgttcttttactcaaatcatccaaaaaaaaagatggcaactctctttattaaca
tccaagctacatcacttaagacctagttatcaattacaagaaataaaacagaaaatagca
gctattgacactctgcttcaacaaaccattttacataaactctatgagtataaaagtaaa
ttatcttctttgttttgttataaaaaaatagatttaagacaaaatcagttaatttacgaa
aaaaaaacctctcttaccaaagtgattgctttattacaagctgctgaccctaaatactta
ttaacaaaagggtatggcattctctttcatgaaaaaaacgattcggttattctctctaca
aaggaagtaattcctaatcaacaagtccgcctaatgttacaagatgggcaattaggttta
actatacataccattaaatctctatga
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