Candidatus Rhabdochlamydia porcellionis: RHAB15C_0000782
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Entry
RHAB15C_0000782 CDS
T07448
Name
(GenBank) RNA pseudouridylate synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
rpor
Candidatus Rhabdochlamydia porcellionis
Brite
KEGG Orthology (KO) [BR:
rpor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpor03009
]
RHAB15C_0000782
Enzymes [BR:
rpor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
RHAB15C_0000782
Ribosome biogenesis [BR:
rpor03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RHAB15C_0000782
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QZA58901
UniProt:
A0ABX8Z488
LinkDB
All DBs
Position
complement(888006..888878)
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AA seq
290 aa
AA seq
DB search
MKKILCKAQLKKKHEGMSLLAFLRLQCKDISVKSLKSAIDTKLCTVNGIVERFSTHLLKI
GDVVILYQTQILHPKHLEILYQDEYLLICNKPAMLISDMRALQSLLKDRWLLGHRLDKET
SGALIFVKNTFVLQQLIALFKKHSVEKFYLALVDGQVLQEEGKIDKPIAKLKSYQGQSLY
GVTTTPGAKRAVTLWRCLKRSKAASLLLCQPMTGRTHQLRVHLSYIGHPILGDTLYAKHF
FCRTSPIRHLLHAYILRFPHPVSHQMITAKAKVPEDFKEHLKELKMTQTI
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagattctgtgtaaagctcaattgaaaaaaaaacatgaagggatgtctttactt
gcgtttttaagactgcaatgtaaagacatctcggttaaatctctaaaatctgcaattgat
acaaagttatgcactgtaaatggaattgttgagcgcttttctacccatcttctaaagata
ggggatgtggtaatcttatatcagacccaaattcttcatccaaaacacttagagatctta
tatcaagatgagtatctgcttatctgtaacaaacccgcaatgttaatcagtgatatgcga
gccctgcaatctttactaaaagataggtggttactaggtcatcgtttggataaagagact
tcaggtgctttaatttttgtgaaaaatacattcgttttacaacaattgattgctttattt
aaaaagcactctgtggaaaagttttatctagcactagtggatgggcaagttttgcaagag
gaaggaaaaatagataagcctattgcaaaattaaaaagctaccaaggacagagcctatat
ggagtaactactacacctggtgctaaaagagctgttactttatggcgttgtttaaagcgt
agtaaagccgcttctcttcttttatgtcaaccaatgaccggtaggacacaccagcttcgt
gtacacttaagctatataggacatcctattttaggcgataccctctatgcaaaacatttt
ttttgcagaacctctcctatacgtcatttgctgcatgcatatatcttgcgtttccctcat
cctgtttctcatcaaatgataacagccaaagcaaaagttccagaggatttcaaagagcac
ttaaaagagctcaaaatgacacagacgatttag
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