Candidatus Rhabdochlamydia porcellionis: RHAB15C_0000816
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Entry
RHAB15C_0000816 CDS
T07448
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rpor
Candidatus Rhabdochlamydia porcellionis
Pathway
rpor03030
DNA replication
rpor03430
Mismatch repair
rpor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHAB15C_0000816
03430 Mismatch repair
RHAB15C_0000816
03440 Homologous recombination
RHAB15C_0000816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpor03032
]
RHAB15C_0000816
03400 DNA repair and recombination proteins [BR:
rpor03400
]
RHAB15C_0000816
Enzymes [BR:
rpor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHAB15C_0000816
DNA replication proteins [BR:
rpor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHAB15C_0000816
DNA repair and recombination proteins [BR:
rpor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHAB15C_0000816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
RNase_H_2
Rv2179c-like
ExoX-like_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QZA58935
UniProt:
A0ABX8YZV3
LinkDB
All DBs
Position
924128..924844
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AA seq
238 aa
AA seq
DB search
MKKLRPIYYDTETTGVKSAKDRIIEIAAYDPIEDRSFVELINPECPIPKEASAIHHITDE
MVKDAPSFRIIAEKFTQFCPDNTVLIAHNNDAFDQLFLEAEFKRAEVPLPFFQYIDTLKW
ARKYRNDLPRHSLQFLRETYGFSSNQAHRALDDVIILHQVFSVMIDDLPIQMVLQLLSKP
QVISRMPFGKHQGKPLEEVPRNYVTWLASSGAFDKSENKELKQSFEKLGILTPFLSST
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattacgacctatttactatgatacagaaacaactggcgtaaaatctgctaaa
gatcgaattattgaaattgctgcttatgatccgatagaagatcgctcttttgtagagtta
atcaatccagaatgccctattccaaaggaagccagtgctatccatcatattactgatgaa
atggtaaaagatgctcctagctttagaataattgcggaaaaattcacacaattctgtcct
gacaatacggtattaattgctcataataacgatgcctttgatcaattatttctggaagca
gaatttaaacgagcagaagttcctcttcctttttttcaatatattgatacccttaaatgg
gcacgtaaataccgtaatgatcttcctaggcattccctacaatttttaagagaaacctat
ggtttctcttctaatcaagcacacagagcgcttgatgatgtaatcatactccatcaagtt
tttagcgttatgattgatgacttgcccattcaaatggtattacagcttctttctaaacct
caagtcatatctcggatgccatttggtaaacaccaaggaaaacctctagaagaggtccct
cgtaattatgttacatggctagcatctagtggtgcttttgataagtcagaaaataaagag
ctaaaacaaagttttgaaaaactaggaattttaactccatttctttcaagtacttaa
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