Candidatus Rhabdochlamydia porcellionis: RHAB15C_0000957
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Entry
RHAB15C_0000957 CDS
T07448
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rpor
Candidatus Rhabdochlamydia porcellionis
Brite
KEGG Orthology (KO) [BR:
rpor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpor03016
]
RHAB15C_0000957
Enzymes [BR:
rpor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RHAB15C_0000957
Transfer RNA biogenesis [BR:
rpor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RHAB15C_0000957
Prokaryotic type
RHAB15C_0000957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Porin_5
Motif
Other DBs
NCBI-ProteinID:
QZA59073
UniProt:
A0ABX8Z430
LinkDB
All DBs
Position
1078247..1078999
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AA seq
250 aa
AA seq
DB search
MIEHKRNLKMTIAYDGFPYLGWQKNNVGPSIEESLQTALQQILQEDVVLSAASRTDAGVH
AKGQIVHFLTASSLCLYKLQGSLNSLLDETISVLHIEEASMQFHSTLNCVKKEYWYHVCF
GKIQNPFFRRTSWHFPRFLEFDSMQKAAHSLVGEHDFSAFCNQRHNWNRNAICNVKELSI
LPISKDRLRFIIHGDHFLYKMVRNLVGTLVYIGCSKLVVNQIPSFLMSKDRSHIGMTAPA
HGLLLKKVCY
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacataagcgcaaccttaaaatgactattgcctacgatggctttccttattta
ggatggcagaaaaataatgtaggtcccagcattgaggaaagtctgcaaaccgctctgcaa
caaatcttgcaagaagatgtggttttgtctgcagcaagtagaacagatgctggagtgcat
gcaaaaggacaaatagttcatttccttacagctagctctctttgcttatataaactacaa
ggatctctcaacagtcttttagatgaaactatttccgttttacatatagaagaagcttct
atgcagtttcattctactttgaactgcgttaaaaaagaatattggtatcacgtatgcttt
ggaaaaatacaaaatcctttttttcgcagaacttcttggcatttccctcgttttttagaa
tttgattctatgcaaaaagcagctcatagtttagtaggagagcatgatttttcagccttc
tgcaaccaaagacataattggaatcgcaatgcgatttgcaatgtgaaagagctatccatt
ttaccgatttctaaagataggttgcggtttatcattcacggggatcactttctttataaa
atggttcgtaatttagtaggaaccttagtgtatataggctgttctaagctagttgttaat
cagatccccagttttttaatgagcaaagatcgttctcatataggaatgacagcccctgct
catggtttattactaaaaaaagtatgttattaa
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