Candidatus Rhabdochlamydia porcellionis: RHAB15C_0001066
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Entry
RHAB15C_0001066 CDS
T07448
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rpor
Candidatus Rhabdochlamydia porcellionis
Brite
KEGG Orthology (KO) [BR:
rpor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpor03009
]
RHAB15C_0001066
Enzymes [BR:
rpor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
RHAB15C_0001066
Ribosome biogenesis [BR:
rpor03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RHAB15C_0001066
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QZA59181
UniProt:
A0ABX8Z0I4
LinkDB
All DBs
Position
1187714..1188646
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AA seq
310 aa
AA seq
DB search
MFTYKNCFTSSLEESHLRLDALLSLRFPNKSRSYFQFLIKQGHVLVNGKAMKKREKTKPG
DEIEIYFQITPEIDLTPESIDLEVLYEDEHLIVINKPAGMVVHPAPGHHRGTFVHALLFH
CKQIDSDDPLRPGIVHRLDKDTSGILIAAKTRTAHAGLIDLFAKRKIEKTYLAICIGMPR
DGLIDTPIARHPSRRKEMTVCMQGKASKTICQVLAQNGSLSLVKLELLTGRTHQLRVHLK
HIGTPILGDETYGNAAINKKFSTKRQLLHAYFISFFHPITQQIVSLTAPIPEDLREAIEL
IDPQREKKSI
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtttacttataaaaattgttttacgtcttctttagaagagtcccatctgcgactcgat
gccttgttatctctaaggtttccaaataaatcgcgtagttatttccaatttttaatcaag
caaggccatgtcctcgttaatggaaaagcgatgaaaaaaagggaaaaaacaaagcctgga
gatgaaattgagatttattttcaaatcactcctgaaatcgatttaactcctgaatctatt
gatttggaggttctttatgaagatgaacatttgattgtcataaataaacctgctggaatg
gttgtccatcctgcccctggtcatcatagaggaacctttgtccatgctcttttatttcat
tgcaagcagatagactctgacgatcccttaagacctggtattgttcatcgattggataaa
gatacttctggaattctaattgctgcaaaaacacgtacagcacatgcaggcttaatagat
ctatttgcaaaacgaaaaatagaaaagacatacttagccatttgtataggtatgccaaga
gatggcctcattgatacgcccattgcacgtcacccctctcgtcgtaaagagatgactgtg
tgcatgcaaggaaaagcctctaaaaccatctgccaggttttagctcaaaatggttctctt
tctttggttaaactagagcttctaacgggccgtacacaccaattaagggtacatttaaaa
catattggtacccctattttaggcgatgaaacttacgggaatgctgctatcaataaaaaa
ttttctactaaaagacaacttttacatgcctattttataagtttttttcaccctattacg
cagcaaattgtctcgttaacagctcctattccagaagacttaagagaagctattgaacta
attgatcctcaaagagaaaaaaaatctatctag
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