Candidatus Rhabdochlamydia porcellionis: RHAB15C_0001114
Help
Entry
RHAB15C_0001114 CDS
T07448
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rpor
Candidatus Rhabdochlamydia porcellionis
Brite
KEGG Orthology (KO) [BR:
rpor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpor03009
]
RHAB15C_0001114
Enzymes [BR:
rpor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RHAB15C_0001114
Ribosome biogenesis [BR:
rpor03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RHAB15C_0001114
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
Methyltransf_15
TRM5-TYW2_MTfase
MTS
Methyltransf_31
PrmA
RrnaAD
PCMT
Motif
Other DBs
NCBI-ProteinID:
QZA59229
UniProt:
A0ABX8Z0M2
LinkDB
All DBs
Position
complement(1246940..1248313)
Genome browser
AA seq
457 aa
AA seq
DB search
MKESVCFIQRFHKKGYGTGKSPGFSKSLHVIGGVIGDELVVEIKTKQRAFIKQITYLSPY
RTAPKCSHVPSCGGCSWQQVDYLFQLEQKQQRVHELFASFIKEEFPLKSILSCDQIWRYR
NKMEFSFSQDRSGQQFLGLILAGSRGHVFNLQECWLVSAWFSSVVIQVRLWWKQSGLDAY
RLDNTGSLRTLIVRQSLNTSDKLVMLTVSGRPEYALNKQQIQQFIQAILLTASEPERISI
FLRIQQAIKGQPTQFFEMHLHGPDHMLERLNVDGKVLTFKISPTSFFQPNPKQAEKLFSS
ALQAIQGPKKHILDLYAGTATLSIVFAKIADRVTAIELNPHAVFDAKVNKELNHIENLEI
ICGDVGQKVQELKNDPGFIPPDLVIVDPPRTGLDNKTIESLLELRAQEIIYISCNPTTQA
NDIQLLMQKGYQLILLQPVDQFPHTVHIEIIALLRLF
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaagcgtttgtttcattcaaagattccataaaaaaggctatggaacaggaaaa
agtcctggtttttcaaagtcgcttcacgttataggtggagttattggggatgagttagtt
gttgaaatcaaaacaaaacaacgcgctttcatcaaacagattacctacttgtcgccctat
agaacagctcctaagtgttctcatgttccctcttgcggaggatgtagttggcagcaggta
gattatttgtttcaattagagcagaaacagcaacgagtccatgagttatttgcttctttt
atcaaagaggagtttccgcttaaatcgattcttagctgcgatcagatttggcgatatcgc
aataagatggagtttagtttttcccaagatcgatctgggcaacaattcttaggactcatc
ttagctggtagcagaggtcatgtatttaatctacaagaatgttggttggtatctgcatgg
ttttcatcagttgttattcaggtgaggctatggtggaaacaaagcggtcttgatgcttat
cgtttagataatacagggtctttacgaacattaattgtacggcaatccctaaatacatct
gataaacttgtgatgcttactgtttccggtaggccagaatatgctttaaataagcagcag
atccagcagtttattcaagcgatcctgcttacagcctctgaaccagaaagaatcagtatc
tttttgcgtattcagcaagcaatcaaagggcagcccactcagttttttgaaatgcattta
catggtccagatcatatgttagagaggcttaacgtggatggtaaagttttaacttttaag
attagccccacttctttttttcaacccaatccgaagcaagcagaaaagttgttttcctct
gcgcttcaagctatacaaggtcctaaaaaacatattcttgatctctatgcaggaactgct
actttatccattgtttttgctaaaatagctgatagggtgaccgctatagagctaaatcct
catgctgtatttgatgctaaagtgaataaagaattaaatcatattgagaatcttgaaatc
atctgtggggatgtagggcaaaaagtacaggaattaaaaaacgatcctggctttattcct
ccagatttggtcattgttgatcctcctcgcacaggattagataacaagaccattgaatct
ctcttagaattacgggctcaagaaattatttacatttcttgcaatccaaccactcaagca
aacgatattcaattgcttatgcaaaaaggataccaattaatattacttcaaccagtagat
caatttcctcatacagtacacattgaaataattgctctattaagacttttttga
DBGET
integrated database retrieval system
