Rickettsia parkeri: MC1_01910
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Entry
MC1_01910 CDS
T01785
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
rpp
Rickettsia parkeri
Pathway
rpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MC1_01910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpp03019
]
MC1_01910
03009 Ribosome biogenesis [BR:
rpp03009
]
MC1_01910
Enzymes [BR:
rpp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MC1_01910
Messenger RNA biogenesis [BR:
rpp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MC1_01910
Ribosome biogenesis [BR:
rpp03009
]
Prokaryotic type
rRNA processing factors
MC1_01910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AFC74536
LinkDB
All DBs
Position
346790..348862
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AA seq
690 aa
AA seq
DB search
MNKKIIIDANFPSETRVVLLGQSNNIEDIEFQTTVRQQNKGNIYLAKVTRIEPSLQAVFI
EYGMDKSGFLPFSEIHPNYYNLPTSERNFPVNAFPEIALSNITVEDDKEKPAAIYDSLVD
SEEIDLKTIEDLVESTFQSELNLEAADDIEMIQSGTPESNIPQYKQYKVQEVIRKNQILL
VQVTKEERGNKCAAFTTYISLAGKYCVLMPNKGSQNGISRKISNGEERKRLKDILNKIVS
GDKNAYSVIVRTAGRGSSTLDLKKDYNYLARLWNKIRKSTIKFPAPCFIHEEDSIIRKTI
RDMCDHNVKEVVIQGQEGYADASKFMQDLLPSELVKLKEHKSKTPIFTKFQVEEQLVKLY
QPVVTLPSGGYIVINPTEALIAIDVNSGKSTSEQNIEETALKTNLEAAKEVAKQVKLRDL
SGLIVVDFIDMSEAKNRKIIERSFKEFLSRDRARIQTGNISQFGLLEFSRQRLRSSFLET
NSAICSHCNGKGVIRASDANAMLILRTIENEIFEERIDVINVFTNIVSVLYLLNNKRAEI
KFIEEKYNIKLNFYSDPNATSDSYSIEKVKLFKKTNNNFNSVKPVIQNHNADYTEEDLKK
EQLRKNKHKWKTANNSNNVANEVKDKSLEAEESVEQTVSVVEEVQVVESNAGLEEAQAAP
KKTKRRYRNKTSNKKCPSDTVEDTEKNAES
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaagattataattgatgctaattttccaagcgaaacaagagtagttttatta
ggacaaagcaacaatatagaagatattgaatttcaaacaaccgtaagacaacaaaataaa
ggtaacatttatttagcaaaagttacaagaatagaaccgtcgctacaagctgtttttata
gagtacggaatggataaaagcggttttttaccgtttagtgaaatccatcctaactattac
aatttgcctacctcggagagaaattttccggttaatgcttttcctgaaatagctctttca
aatattacggttgaggatgataaagagaaaccggctgctatatatgattctttggttgat
agtgaagaaattgacctaaaaaccatagaagatttagtagagagtacattccagtcagaa
cttaatttagaagcggctgatgatattgaaatgattcaaagcggtacccctgagtcaaat
attccgcaatataaacaatataaagttcaagaagtaataagaaaaaaccaaatattatta
gtgcaggttactaaggaagaacgaggaaataagtgcgccgcttttactacttatatatcc
ttggctggtaaatattgtgttttaatgcctaataaaggttcgcaaaacggtatatcgcgt
aaaatatcaaacggggaagaaagaaaaagactgaaagatattttaaataaaatagtaagc
ggtgacaaaaatgcttatagcgtcattgttagaacagcaggtagaggaagtagcacctta
gatttaaagaaagactataattatttagcaaggttatggaataaaattcgtaaaagtact
attaaatttccggctccgtgttttattcatgaggaagatagtataatacgtaaaaccata
cgtgatatgtgcgatcacaatgttaaagaggtggtaattcaaggacaagagggttatgca
gatgcttcaaaatttatgcaggatttattaccttcagagcttgtaaagctgaaagagcat
aaaagtaaaactcctatatttactaagtttcaagtagaagagcaattagttaaattatat
cagcctgtagtgacgttaccttcaggaggatatatcgttattaatcccacggaagctctt
attgcaattgatgtaaattccggtaaatcaacttctgaacaaaatattgaagaaacggca
ctaaaaactaatttagaagcagccaaagaagtagcaaagcaagtaaagcttagagatcta
tcaggtttgatagttgttgattttatagacatgagcgaagctaagaatcgtaaaattatt
gaacgatcctttaaagagtttttaagtcgtgatcgtgctcgtatacaaaccggtaatatt
agtcagtttggactacttgaattctcaaggcagagattacgttcttctttcttagaaact
aattcggcaatttgttctcattgtaacggtaaaggagtcattagagcaagtgacgctaat
gctatgttaattttacgtactatagagaatgaaatttttgaagaaagaattgatgtaata
aatgtttttaccaatatcgtttcagttctttatctacttaataataaacgtgctgagata
aaatttattgaagaaaaatataatataaagcttaatttttattccgatcctaatgctaca
tcagatagttattcgattgaaaaagtgaagctgtttaagaaaactaacaataattttaat
tctgttaagccggtaattcagaatcataatgccgattatactgaagaagatctgaaaaaa
gaacagttacgcaaaaataaacataaatggaaaacagctaataatagtaataatgttgct
aatgaagtaaaagataagagtttagaggcagaagaatcggtggagcaaaccgtaagcgtt
gtggaagaggtgcaagttgtagaaagtaatgccggcttagaagaagcacaagctgctcca
aaaaagacaaaacgtagatatcgtaataaaacatcaaataagaaatgtccttctgatacc
gtcgaagatacggaaaagaatgcagagtcttga
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