Rickettsia parkeri: MC1_01930
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Entry
MC1_01930 CDS
T01785
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rpp
Rickettsia parkeri
Pathway
rpp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MC1_01930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpp03400
]
MC1_01930
Enzymes [BR:
rpp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MC1_01930
DNA repair and recombination proteins [BR:
rpp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MC1_01930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AFC74540
LinkDB
All DBs
Position
352528..353343
Genome browser
AA seq
271 aa
AA seq
DB search
MKIVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYSGQ
KSYNGVAIISKFPLNNVFSLELYNSDKRHIAAIVNDIEIHNFYVPAGGDIPDIEVNTKFK
HKLEYVRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVE
LQNALGFIDSSRYFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALFSMHLL
SEARDWSSPSDHVPYFVTFNLQMSSRGQATG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagttacttggaatattaattcattgcgtctacggatcgatttattaagaaaa
ttagcatatgaacatcagccggatattattttacttcaagaaacaaaggtagctgactca
ttatttcctcttgaagttattaaaaatataggctatgaacatgtaatatattcagggcag
aaatcatataacggtgttgctattatttcaaaatttcctttgaataatgttttttcattg
gagttatataatagtgataaaaggcatatagcagctatagttaatgatatagaaatacat
aatttttatgttcctgccggcggtgatatacctgatatcgaggtaaatacaaaatttaag
cataagctcgaatatgtaaggttaatgcaggaatggttaacgactaaccgtactaaaaac
gataaaatgattattgttggggacttgaacattgctccgcatgaacatgatgtatggtct
agtaagcagttgcgaaatgttatcagtcataccgatattgaacgctcgttattggtagag
ctacaaaatgcgttaggttttattgatagtagcagatatttcgtatcgcttgacgaaaaa
ttttatacttggtggagttatagaaatatagattggaaaaaatctaacagaggtagaaga
cttgatcatatttgggttagcgataatttaaaaggtgcattattttctatgcatttacta
tcagaagcacgtgattggtcttcaccttcggatcatgtaccatattttgtgacttttaat
ttacagatgtcatcccgtggtcaagccacgggatga
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