Rickettsia parkeri: MC1_02525
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Entry
MC1_02525 CDS
T01785
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rpp
Rickettsia parkeri
Brite
KEGG Orthology (KO) [BR:
rpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpp03032
]
MC1_02525
03400 DNA repair and recombination proteins [BR:
rpp03400
]
MC1_02525
Enzymes [BR:
rpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MC1_02525
DNA replication proteins [BR:
rpp03032
]
Prokaryotic type
DNA Topoisomerases
MC1_02525
DNA repair and recombination proteins [BR:
rpp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MC1_02525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
Zn_ribbon_Top1
POLR3C_WHD
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AFC74642
LinkDB
All DBs
Position
complement(446507..448837)
Genome browser
AA seq
776 aa
AA seq
DB search
MKLVIVESPAKAKTINKYLGDEFKVIASFGHIRDLPSKKGSVLPDENFAMKYDISDKAGK
YVDAIVKDAKKADAVYLATDPDREGESISWHVAEVIKEKNQVKSDDFFKRIAFNEITKKA
IIHAVENPRKLDTNLVNAQQARRALDYLVGFTLSPLLWRKLPGCKSAGRVQSVALRLICE
REDEIERFKSEEYWDISLKMQNSNNELFTAKLTHVNDQKLEKFSIINEKNAKDLTKKLKS
QKFHVDKIEKKQQKRQPQPPFITSSLQQEAARKLGFNAKKTMQIAQKLYEGVDIGKETIG
LITYMRTDGVTLSNDAIADIRKLIDKSYGDKYLPTSPRIYKSKVKNAQEAHEAIRPTNIT
YTPDSLKEKLDKDYYKLYELIWKRTIACQMENVIMDLVVANLASENKEYLAKANGSTIAF
DGFYKVYRESMDDEAEEENKMLPPLTEQEQLKTKEVIPNQHFTEPPPRYSEASLVKKLEE
LGIGRPSTYASILSVLQDRKYVALEKKRFIPEELGRLVTVFLVGFFKKYVEYDFTAGLEN
ELDAIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKALDYHLFGENKESKIC
PSCNTGELSLKLGKFGAFLACSNYPECTFRKSIVSGNDNNENEGEPAAMPNENKVLGTDK
DGVEIYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLNQNDITLDIALKLLSLPLKIGIHK
DSDEEIMIGYGKFGPYIKYMDQFISVQKKYDFLNLSLDDAMKLIEENKAKLEKKQA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtaatagtagaatcgccggcaaaggcaaaaacgataaataaatatttaggt
gatgagtttaaggtcattgcatcattcggtcatattagagatttaccttctaaaaaaggc
tcggtgttacctgatgaaaattttgcaatgaaatatgatatttccgataaagccggtaaa
tatgtagatgccatagttaaagatgctaaaaaagctgatgcagtatatcttgcaaccgat
cctgatcgtgagggtgaatctatctcatggcatgttgcagaggtaataaaagaaaagaat
caagttaaatccgatgattttttcaaaaggatagcctttaacgaaatcactaaaaaagca
attattcatgccgttgaaaaccctaggaaacttgacactaacttagtaaatgcccaacaa
gcaagaagagctttagactatttagtcggctttaccctttcacctcttttatggcgtaag
ttaccgggatgtaaatcggcaggacgtgtgcagtccgtggctctgcgattaatatgtgag
cgagaagatgaaatagagcgttttaagtcagaagaatattgggatattagccttaaaatg
caaaatagtaataacgaactatttactgctaaattgactcacgtaaacgatcagaagtta
gaaaaattctcaattattaacgaaaaaaacgccaaagatttaaccaaaaaattaaaatct
caaaaatttcatgttgataagatagaaaaaaaacaacaaaaacgtcaaccacaacctcct
tttattacttcatcactacaacaagaagcagcaagaaaattaggttttaatgctaaaaag
actatgcaaatagcacaaaaactttatgagggtgttgatataggtaaggaaactataggg
cttattacttatatgagaaccgacggcgttacattatcaaatgatgcaatagcagatata
cgtaagttaatcgataaaagttacggcgataaatatttaccgactagccctagaatttat
aaatccaaagtaaaaaatgctcaagaagctcatgaagcaataagacccacaaatattact
tatactcctgatagcttaaaagaaaagctagacaaggattattataagctttatgagttg
atttggaaaagaactatagcctgccaaatggaaaatgttataatggatttggtagttgca
aatttagcttcggaaaataaagaatatttggcaaaagcaaacggatcgactatagccttt
gacggattttataaggtttatcgtgaaagtatggacgatgaagctgaagaagaaaataaa
atgctgccgcctttaacagaacaagagcagctgaaaactaaagaagttattccaaatcaa
cattttaccgaaccgcctccaagatattcagaagcaagtttagtgaaaaaacttgaagag
cttgggatcggtcgtccttcgacctatgctagtattttatcggttttacaagatcgaaaa
tatgttgctcttgagaaaaaacgatttatacctgaagagcttggacgtttggtaacggta
tttttagtcggtttcttcaaaaaatacgttgaatatgattttactgcaggacttgaaaac
gaattagacgcaatagcagccggcaaacttgaatggaaagctgctttaaataatttttgg
agcggttttaaccataatattgaatcagtaaacgagcagaaaataaccgagattattagc
tatgtacaaaaagcccttgattatcacctgttcggtgagaataaagaatctaaaatttgt
ccttcatgtaacacgggcgagcttagcttaaagcttggtaagttcggagcgtttttagca
tgtagtaattaccctgaatgtacttttagaaaatctattgttagcggtaacgataacaac
gagaatgaaggcgagcctgccgctatgcctaatgagaataaagttttaggtacggataaa
gacggagtagaaatatatctgaaaaaaggaccttacggaccttatattcaacttggcaaa
caagaaggcaaagtaaagccgaaacgtagccccgtgcctgctagtttgaaccaaaatgat
attacacttgatatagcattaaagcttctaagcttaccgctaaaaataggtattcataaa
gatagcgacgaggaaattatgataggatacggtaaattcggtccttacataaaatatatg
gatcaatttatttcggtgcaaaaaaaatatgattttctaaatttaagcttagatgatgcg
atgaagctaattgaagagaataaagcgaaattagagaagaaacaggcgtaa
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