Rickettsia parkeri: MC1_03270
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Entry
MC1_03270 CDS
T01785
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rpp
Rickettsia parkeri
Pathway
rpp00300
Lysine biosynthesis
rpp00470
D-Amino acid metabolism
rpp01100
Metabolic pathways
rpp01110
Biosynthesis of secondary metabolites
rpp01120
Microbial metabolism in diverse environments
rpp01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rpp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MC1_03270 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MC1_03270 (dapF)
Enzymes [BR:
rpp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
MC1_03270 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Fer2
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
AFC74773
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All DBs
Position
569723..570535
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AA seq
270 aa
AA seq
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MISKINFVKMHGLGNDFVIVNKRDLSSSYDLSQLAKNMAERHTGIGCDQFIIYEEHNDFY
EMIIYNIDGSSAKLCGNATRCLAKLIYLDTGKQDITVMVGNKKLLCNVNDEDNISVNVGS
VSFNEAWMPSRDKVWEFAERYMIDLKETICVDIGNPHVVIFSKLEPQDQKIVGERLQAKE
LFADGVNVNFAEVKDNKIYLSVWERGAGLTLACGSGACGSFAAGLKRGFIHSPSTIVFKH
GNLTMKEENGNIIMQGAATLVARGEYYCEQ
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgattagtaaaattaattttgtaaaaatgcatggtctcggtaatgattttgttattgtt
aacaaacgagatttatcaagttcatatgatttatcgcagttagcaaaaaatatggctgag
cgtcatacaggtattggttgcgatcagtttattatttatgaagagcataatgatttttat
gaaatgattatatataacatagacggctctagtgctaaattatgcggtaatgctacaaga
tgtttagccaagttaatttatcttgatacgggaaagcaagatattaccgtaatggtaggc
aataaaaaattgctatgtaatgtcaatgatgaagataatattagcgttaatgtaggaagc
gtaagttttaatgaagcttggatgccaagtcgtgataaagtttgggaatttgcagagcgt
tatatgattgatttaaaggaaactatttgcgttgatataggtaatccgcatgtagttatt
tttagtaagttagaacctcaagatcaaaaaattgtcggtgaaagattgcaggctaaggaa
ttattcgcagatggggtaaacgttaattttgctgaagtaaaagataataaaatctattta
tccgtttgggagcggggggcagggttaacccttgcttgcggaagcggagcttgcggtagt
tttgctgccggtttaaagcgcggttttattcattcaccaagtactatagtctttaagcac
ggtaaccttactatgaaagaagaaaatggtaatataataatgcaaggggcagctacgctt
gtagcacgtggggaatattattgtgagcaataa
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