Rickettsia parkeri: MC1_03730
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Entry
MC1_03730 CDS
T01785
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rpp
Rickettsia parkeri
Brite
KEGG Orthology (KO) [BR:
rpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpp03016
]
MC1_03730 (truB)
Enzymes [BR:
rpp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MC1_03730 (truB)
Transfer RNA biogenesis [BR:
rpp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MC1_03730 (truB)
Prokaryotic type
MC1_03730 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AFC74852
LinkDB
All DBs
Position
complement(649601..650638)
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AA seq
345 aa
AA seq
DB search
MSNYWLNIYKPRGISSAQLVSIVKKILGKTKIGHAGTLDVEAEGILPFAVGEATKLIHLL
IDARKTYIFTVKFGMQTNSGDCAGKVIATKDCIPSQEEAYAVCSKFIGNVTQIPPAFSAL
KVNGVRAYKLAREGKKVELKPRNITIYDLKCLNFDEKNATATYYTECSKGTYIRTLAEDL
ALSLQSLGFVIELRRTQVGIFKEENAIRIKSPDEITKNALEEKSIKIEAILDDILVLDAT
DSQAQQIKYGQKCLFNYEKDFRHLAKFAYREEFKGNTERSTTAYTLVREDASTGLTYKLP
LEVEFGKMSVDLLWVRYKGTLLAIGSLNKSCFNSLRVFNLTQDFF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattattggttaaatatttataaaccaagaggtataagttctgctcaacttgtt
agcatagtaaaaaaaatactcggtaaaaccaagataggacatgccggtactttagacgta
gaagcggaaggaatattaccgtttgccgtaggtgaagctacaaaactgatacatctgcta
attgatgctagaaaaacctatatttttaccgtaaaattcggaatgcaaaccaatagcggc
gattgtgccggtaaagtaatagcaacgaaagattgtatcccttctcaagaagaagcttat
gccgtatgttctaagtttatcggtaacgtaacacaaataccgccggctttttcagctctt
aaagttaacggtgtaagagcttataaattggctagagagggaaaaaaagtagaattaaag
ccacgaaatataactatttatgatctaaaatgtttaaattttgatgagaaaaatgctacc
gctacatactatacggaatgctcaaaaggtacttatataaggactttagcagaagatttg
gcattgtccttgcaaagtttaggatttgtgatagaattacgccgtactcaggttggaata
tttaaagaagaaaatgctatccgaattaaatcgcctgacgaaattaccaaaaatgcccta
gaggaaaaaagtataaagatagaagcaatactggacgacatcctggttcttgatgcaact
gacagccaagcacagcaaattaaatatggacagaaatgtttatttaattatgaaaaagac
tttagacatcttgccaaatttgcttatagagaggaatttaaaggaaacacggaacgcagc
accacagcgtacactttagtacgtgaggatgcgagtaccggattgacgtacaaattacct
ctagaagtagagtttggcaagatgtctgttgatcttttgtgggttcgctataaaggcact
ttgcttgcaataggtagcttaaacaagagttgctttaattctttacgagtatttaattta
acacaagacttcttttaa
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