Rickettsia parkeri: MC1_04965
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Entry
MC1_04965 CDS
T01785
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rpp
Rickettsia parkeri
Brite
KEGG Orthology (KO) [BR:
rpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpp03032
]
MC1_04965 (gyrB)
03400 DNA repair and recombination proteins [BR:
rpp03400
]
MC1_04965 (gyrB)
Enzymes [BR:
rpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MC1_04965 (gyrB)
DNA replication proteins [BR:
rpp03032
]
Prokaryotic type
DNA Topoisomerases
MC1_04965 (gyrB)
DNA repair and recombination proteins [BR:
rpp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MC1_04965 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
TPR_26
Motif
Other DBs
NCBI-ProteinID:
AFC75068
LinkDB
All DBs
Position
complement(865173..867596)
Genome browser
AA seq
807 aa
AA seq
DB search
MSEIEEKFNESSYGADSIKVLKGLEAVRKRPGMYIGDVGDGSGLHHMIYEVVDNAIDESL
AGYCDLVRVTLNKNGSVTVSDNGRGIPVEIHGEEGISAAEVIMTQLHAGGKFDQNAYKVA
GGLHGVGVSVVNALSEWLELRIWRNNKEYLMRFNNGITEAPLAVVKENIDKKGTEVTFFP
SVETFTNIEFDFGTIEHRLRELAFLNSGVKILLVDNRFEEVKKVEFYYTGGIEAYIKYID
RAKHAIHPCIVVNTENAESGISLELAMHWNDSYHENILCFTNNIRQRDGGTHLSAFKSAI
TRVITSYLDTTGLNKKAKNYFSGEDTREGLCCVLSVKVPDPKFSSQTKDKLVSSEVRPVV
ENAVYTKVLEWFEEHPAEAKAIIAKIMEAANAREAARKARELTRRKSALEVSNLPGKLAD
CHAKDPAISELFIVEGDSAGGTAKQGRDSKIQAILPLRGKILNVERARFDKMLGSDQIGT
LITALGISVERAFSLEKLRYHKVIIMTDADVDGSHIRTLLLTFFYRHMPELINKGYLYIA
QPPLYKVKKGAAEFYLKNEQALQDYLIKSTINDATLILDDKERLVGDNLEELINKVVKFN
GLLDHASKKFNRSITEILAINDLLNNKIFEPESDLRLKKALDVLNSLEDSPDKTNWEVLK
HENKIEFFCFSRGLKESKILLKEQLESFEFVQISKLALTIFDIFSKQLKLIVKSQEFDIL
TPSQLLNTIIECGKRGINIQRFKGLGEMNSDQLWETTLDPTKRTLLQVRVAEIDEAEGIF
STLMGDVVEPRRLFIQANALNVVNLDV
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaattgaagaaaaatttaacgaatcatcatacggtgctgattccataaaagtt
ttaaaaggtcttgaagccgtaagaaaaagaccgggaatgtatattggggatgttggagac
gggtcgggtctacatcatatgatttatgaagtagtcgacaacgctatcgatgagtcgctt
gctggttattgcgatctagtacgagtaacattaaataaaaacggttcagtaaccgtatcc
gataacgggcgaggtatacccgttgaaattcatggagaagaaggcatatcggcagctgaa
gttattatgacgcaacttcacgccggcggtaagtttgaccagaacgcttataaggttgca
ggcggtctacacggtgttggtgtatcggttgtaaatgctctttctgaatggcttgagctg
cgtatttggcgtaataataaggaatatttgatgagatttaataatggtataacggaagct
ccgcttgcggttgtcaaagaaaatattgataaaaaaggtacagaagttactttttttccg
tctgtagaaacgtttactaatatagaatttgattttggcactatagagcatcgtcttcgt
gagcttgcttttttaaattcaggcgtaaagattttactcgtcgataatcgctttgaagaa
gttaaaaaagtagagttttattatacgggtggtatagaagcttatataaaatatatagac
agagcgaagcacgctatccatccatgtatagtagttaatacggagaatgctgagtctggt
ataagccttgagcttgcgatgcattggaacgattcttatcatgaaaatattttatgcttt
actaataatattaggcagcgtgatggcggaactcatcttagtgctttcaaatcagcgata
acacgtgttattacctcgtatcttgatactacgggtcttaataaaaaagctaaaaattac
tttagcggtgaagatactagggaagggctatgttgtgtgctttccgttaaagtgcctgat
cctaaattttcttctcaaacaaaagataagctagtaagctccgaagtacgaccggttgtt
gagaatgccgtttatacaaaggttcttgagtggtttgaagagcatccagcagaagctaag
gcaattatagctaagattatggaagctgcgaatgctcgtgaagctgctagaaaagcaagg
gaactcactcgaagaaaatcagctttagaagtttcgaatttaccaggtaaacttgcagat
tgccatgcaaaagatcctgctatttcagaattgtttattgttgagggggactctgcgggc
ggtactgcaaagcagggtagggatagcaaaattcaggctatattgcctttgcgtggtaaa
attttgaacgttgaacgtgcaagatttgataaaatgctcggttcggaccaaatcggtacg
ttaattacagcgcttggaattagtgttgaacgagcattttccttagaaaagcttagatac
cataaagttattattatgaccgatgctgatgttgatggttcgcacattagaactttatta
ctcacgtttttctatcgtcatatgcctgagctaataaataaaggctatctatatatagct
cagccaccgctttataaagtaaagaaaggagcagccgagttttatttaaagaatgagcaa
gcgctgcaagattatttgatcaaatcaactattaatgatgcaaccttaattctagacgat
aaagagcggttagtcggtgataatttagaagagctaattaataaagtggttaagtttaac
ggcttgcttgaccatgctagcaaaaaatttaatcgctcaattaccgaaattcttgctatt
aatgacttacttaataacaaaatatttgagcctgaaagtgatttaagacttaaaaaagct
ttagatgttttaaatagcttagaagattcgcctgataagactaattgggaagttttaaaa
catgaaaataaaatagagttcttctgttttagtaggggtttaaaagaaagtaaaatatta
ttgaaagagcagttagaatcatttgagtttgtacaaatatcaaagcttgctttaacgatt
tttgatatatttagtaagcaattaaagcttatagtgaaaagtcaggaattcgatatttta
acaccgagtcagttgttaaataccattatagaatgcggaaaaagaggtataaatattcag
cgttttaaggggcttggtgagatgaattccgaccagctatgggaaactactcttgaccct
acaaaaagaactttgcttcaggtaagagttgcagaaattgatgaagcagaaggcattttc
tctactttaatgggtgacgttgttgaacctcgcaggttatttatccaagcaaatgcgttg
aatgtcgtgaatttggatgtgtag
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