Rickettsia parkeri: MC1_05500
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Entry
MC1_05500 CDS
T01785
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rpp
Rickettsia parkeri
Pathway
rpp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MC1_05500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpp03021
]
MC1_05500
03400 DNA repair and recombination proteins [BR:
rpp03400
]
MC1_05500
Enzymes [BR:
rpp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MC1_05500
Transcription machinery [BR:
rpp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MC1_05500
DNA repair and recombination proteins [BR:
rpp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MC1_05500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Par3_HAL_N_term
Motif
Other DBs
NCBI-ProteinID:
AFC75165
LinkDB
All DBs
Position
complement(956872..957894)
Genome browser
AA seq
340 aa
AA seq
DB search
MLSLSKNWNTLIKPNKVAYENFPETNNKAKIVVEPLERGFGLTLGNAMRRVLLSSLQGAA
ITSIKIPAIEHEFSSIPGVKEDVSEVILNIKGIEVKMHVAEKRIMKLKATGPCVVTAGMI
ETGHDVEILNPDHVICDLAKDKQLEMELTCKVGKGYVLSTNSYEDNLPIGEIAIDALFNP
VKSVTYKVENTRVGQVTDYDKLIMFVETNGDVLPEMAVGLAARILQEQLQLFISFEEQEE
DKQVKTDALPFSPYLLKRVDELELSVRSANCLKNDNIIYIGDLVKRTESDMLRTPNFGRK
SLNEIKEILAKFNLRFGMDVPDWPPENIQELSKRYEDSYN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgttaagtaaaaattggaatactttaataaagccgaataaagttgcttatgaa
aattttccagaaaccaataataaagctaaaattgtagttgaacctttagaaagaggtttt
ggtttaacactcggtaatgctatgagaagagtattactttcttctttacaaggagcagct
atcacgtctataaagatccctgctatagaacatgaattttcttctatacccggtgtaaaa
gaagatgtatctgaagtgattttaaacattaaaggtattgaagtaaaaatgcatgttgca
gaaaaacgtatcatgaaattaaaagcaacaggaccttgtgttgtaacggccggtatgatt
gaaacaggtcatgatgtagaaatactgaatccggatcatgtaatttgtgatctagctaag
gacaagcagcttgaaatggaattaacttgcaaggttggtaaaggatatgtacttagcaca
aatagttatgaggataatttacctattggtgaaatagctatagatgctttatttaatccg
gtaaagagtgttacttataaggtagaaaatactagggtaggtcaggttaccgattatgat
aaattaattatgtttgtagaaactaacggtgatgtattacctgaaatggctgtaggttta
gctgcacgtattttacaggagcaattacaattatttatttcttttgaagaacaggaagaa
gataagcaagttaaaactgatgctttaccattttcaccttatttacttaagagagttgat
gaattggaattatcggttagatcggcaaactgtttgaaaaatgataatataatatatata
ggggatctagtaaaaagaacggaatccgatatgctaagaactccaaatttcggtagaaaa
tctttaaatgagattaaagaaatattggcaaaatttaatttaagattcggtatggatgta
ccggattggccaccggaaaatattcaggaattatctaaacgttatgaagattcttataat
taa
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