Rickettsia parkeri: MC1_06870
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Entry
MC1_06870 CDS
T01785
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rpp
Rickettsia parkeri
Brite
KEGG Orthology (KO) [BR:
rpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpp03016
]
MC1_06870
Enzymes [BR:
rpp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
MC1_06870
Transfer RNA biogenesis [BR:
rpp03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
MC1_06870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AFC75394
LinkDB
All DBs
Position
complement(1187880..1189217)
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AA seq
445 aa
AA seq
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MSKKLYIKTYGCQMNVYDSVKMQDLLYPFGYEPTENIEEADVIILNTCHIREKAAEKTYS
ELGRIKKLQDTRTKQGLSSAIIVVAGCVAQAEGEEIFTRTPYVDIVVGPQSYYNLPELIS
KVVRHEKHLIDLDFVEEAKFDQLPEQLYPQGTSAFISVQEGCDKFCTFCVVPYTRGAEFS
RNVEQVYREALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERLR
YTTSHPIDMNNDLIKLYGTEPKLMPFLHLPVQSGSNKILKAMNRKHDREYYFDIINRLRE
ARPDIVLSSDFIVGFPGETDEDFEDTLDLVRRVKYGQCYSFKYSPRPGTPGATRTDQIPE
HIKSERLTILQQELIAQQLAFNTSCVGSTMKVLFDRNGKFDDQIIGKTPYMQSVYIQNPN
KSLLGKIIDVKITKASLNSLTGEIL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaagctttatattaagacctacggatgtcagatgaatgtttatgattccgtt
aagatgcaggatttgctttatccctttggctatgaacctactgaaaatattgaagaagca
gatgttattattctaaatacttgtcatatcagagagaaagcagctgagaaaacttattct
gaactcggtcgtattaagaaactacaagataccagaacaaaacaaggtttaagttctgca
ataatagttgtagccggttgtgttgcacaggcggaaggggaggagatttttacaagaact
ccttatgttgatattgttgtcggtccgcaatcttattataacctaccggaattaatctca
aaagtcgttagacacgaaaagcacttaatcgatcttgattttgttgaagaagcaaaattt
gatcagctacctgagcaattatatccgcaaggaacaagtgcctttatatcggtacaggaa
gggtgcgataaattttgtactttctgcgtagtaccttatactagaggtgctgaattttca
agaaatgtagagcaggtttacagagaagcactaaaagtagttagtagcggtgctaaagaa
attatgttacttggacaaaatgtcaatgcatatcacggtaaaggtcctgcagataaaata
tttagtctagccgatttactcaaacatctagcacaaattcccaatttagagagattacgt
tataccacctcacacccgatagatatgaataatgatctaataaagctgtacggcaccgaa
cctaaattaatgccgtttctacatctaccggtgcagtcaggttcaaataaaatattaaaa
gccatgaaccgcaaacatgatcgggaatattattttgatataattaatcgcttaagagaa
gcaaggcctgatatagttttatcctctgattttattgtcgggtttcccggtgaaacagat
gaagattttgaggatacattagatttggtccgtagagtaaaatacggtcagtgttattcg
tttaaatatagcccacgtcccggcacacctggtgcaactagaactgaccaaatacctgaa
catataaaatcagagagattaactatattacaacaagaactcatagctcagcaactagct
tttaatacaagttgtgttggtagtactatgaaagttctatttgatcgcaatggtaaattc
gacgaccagataataggtaaaactccatacatgcagtccgtatatatccaaaaccctaat
aaatctttacttggtaaaatcattgatgtaaaaattactaaggcttcacttaatagttta
acaggcgaaatattataa
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