Rickettsia prowazekii Rp22: rpr22_CDS507
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Entry
rpr22_CDS507 CDS
T01977
Symbol
rho
Name
(GenBank) Transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
rpq
Rickettsia prowazekii Rp22
Pathway
rpq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
rpr22_CDS507 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpq03021
]
rpr22_CDS507 (rho)
03019 Messenger RNA biogenesis [BR:
rpq03019
]
rpr22_CDS507 (rho)
Transcription machinery [BR:
rpq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
rpr22_CDS507 (rho)
Messenger RNA biogenesis [BR:
rpq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
rpr22_CDS507 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
AAA_22
AAA_25
OB_RNB
Fungal_virus_P2_C
Spore_III_AA
S1CSD-TOTE-2
NACHT
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
ADE30053
UniProt:
D5AXB4
LinkDB
All DBs
Position
complement(648543..649916)
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AA seq
457 aa
AA seq
DB search
MNTTNKQLTEELNNTESNNDHNDFAENNIINLKQLKRKLPEELQVQAEELKIENISSLLK
QELVFAILKKSVEQGGLIVGEGVLEVLPDGFGFLRSPEVNYLAGPDDIYISPSQIRRFGL
RTGDTVEGQIRAPKAGERYFALLKVNRVNFEDPAKAYHRVHFDNLTPLYPDEKLGLELEN
NSKDSKDFSTRVIELVAPMGKGQRALIVAPPRTGKTVLLQNIAHAITTNNPEVFLIVLLI
DERPEEVTDMQRSVRGEVVSSTFDEPASRHVQLAEMVIEKAKRLVEHKKDVVILVDAITR
LARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIENGGSLTIIGTALIETGSRMDE
VIFEEFKGTGNSEIVLDRKIADKRIYPAIDITRSGTRKEDLLVDKIILNKMWVLRRIIDP
MGSSEAIEFLLKKLENTKTNCAFFEMMKSPERPRNGL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaactaataaacaattgacagaagaactgaataatactgaatccaataacgat
cataatgattttgcagagaataatattattaatttaaaacaattaaaacgtaaattacct
gaagaattacaagttcaagcagaagaattaaaaattgaaaatattagttcattacttaaa
caagaattagtttttgcaattttaaaaaaatctgtagagcagggaggtttaatagtagga
gagggcgtacttgaagtattacctgatggatttggttttttacgttcgcctgaagtaaat
tatttagcaggtcctgatgatatttacatctctcctagtcaaattcgtcgttttgggctt
cgtaccggtgatacggtagaaggtcagattagagcaccaaaagccggagaacgttatttt
gctttactgaaagtaaatagagtaaattttgaagaccctgctaaggcttatcatcgtgta
cattttgataatttaactccattatatcctgatgaaaaattaggattagaactagaaaat
aatagtaaagatagtaaggattttagtacacgggttattgagcttgtggctcctatgggt
aaagggcagcgtgcattaatagtagcgccacctcgtactggtaaaaccgtattattacaa
aatatagcacatgcaattacaacaaataatccagaagtatttttaatagtattattaata
gatgaaaggcctgaagaagtaacagatatgcaacgttccgtgcgtggagaggttgttagc
tccactttcgatgaacctgcaagtagacatgtgcagcttgcagaaatggtgattgagaaa
gcaaaacgtctagtagaacataaaaaagatgtggtaattttagtagatgcgataacacga
cttgctcgtgcttataatacagttgtaccttcatcagggaaagtattaactggcggtgtt
gatgctaatgcactacagagaccaaaaagatttttcggagcagctagaaatattgaaaat
ggtggctcacttactataattggtacagctttaattgaaactggttctcgtatggatgag
gtaatttttgaggagtttaaaggtacaggtaattctgaaatagttttagatcgtaagatt
gcagataagcgtatttatccggcaattgatataacaagatcaggaactagaaaagaagat
ttattagtagataagataattttaaataaaatgtgggttcttcgtcgtattatcgatcca
atgggtagcagtgaagcaatagagtttttgctcaaaaaacttgaaaatactaaaactaac
tgtgcgttttttgagatgatgaagagtcctgaacgccctagaaacggtttatag
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