Rickettsia prowazekii Madrid E: RP389
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Entry
RP389 CDS
T00018
Symbol
RP389
Name
(GenBank) PENICILLIN-BINDING PROTEIN DACF PRECURSOR (dacF)
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rpr
Rickettsia prowazekii Madrid E
Pathway
rpr00550
Peptidoglycan biosynthesis
rpr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RP389 (RP389)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpr01002
]
RP389 (RP389)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpr01011
]
RP389 (RP389)
Enzymes [BR:
rpr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RP389 (RP389)
Peptidases and inhibitors [BR:
rpr01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RP389 (RP389)
Peptidoglycan biosynthesis and degradation proteins [BR:
rpr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RP389 (RP389)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Beta-lactamase
CytoC_RC
DUF7147
TPR_23
Motif
Other DBs
NCBI-ProteinID:
CAA14846
UniProt:
Q9ZDE2
LinkDB
All DBs
Position
477740..478660
Genome browser
AA seq
306 aa
AA seq
DB search
MFRRFLLPYIFILIFCFAPISEAKKIVKNTNKHPIQTSLVIDAKNGKVLQAHNAQVRIYP
ASLTKLMTLYLIFEAIESRKLSLDKKLLVSAKASKMPHCKLGLRAGDHITVREAINGLII
KSANDVAVTVAEGMKGSEKAFAHLMNVRAKTLGMKNTFFKNASGLHDPFQQTTARDIAKL
AIALKRDYPKYYPLFSKTHFVFRGNVVNGHNSVTKHYQGAEGMKTGFHTPAGYNLVTTAS
RNNKSLIAVITGGKSAASRDQKMMRLLDHHFGVKTITSKPSIKLASNNKANTKAKSKIIK
RKNIRS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaagatttttactaccttatatctttattttaatattttgctttgctcctata
agcgaagcaaaaaaaattgtaaaaaataccaataaacatcctatccaaactagtttagta
attgacgcaaaaaatggtaaagttttgcaagcacataatgcacaagtgcgaatttatccc
gcttctttaactaagttaatgactctatatttaatatttgaagcaattgaatcacgtaag
ttatctttagataaaaaattacttgtatcggcaaaagcttcaaaaatgccgcattgtaaa
cttggtttaagagcaggtgaccatataaccgttagagaggcaattaatggattaataata
aaatctgctaatgatgttgcagtaactgttgctgagggtatgaaaggttcagaaaaagct
tttgctcatttaatgaatgtgagagctaaaacattaggtatgaaaaacacattttttaaa
aatgcttcaggtttgcatgatccatttcaacaaactaccgcaagagatatagctaaactc
gctattgcacttaaaagagattaccccaaatattatccattattttctaaaactcatttt
gtatttcgtgggaatgtagtaaacggacataatagtgttactaaacattatcaaggtgct
gaaggtatgaaaacaggatttcatactcctgcaggttataatttagtaacaactgcttct
cggaataataaatcattgattgcagttattactggcggtaaaagtgcagcatctcgtgat
caaaaaatgatgaggttattagatcaccattttggtgttaaaactataacttctaagcct
tcaatcaaacttgcctctaataataaagctaatacaaaagcgaaatcaaaaataataaag
agaaagaatatacgtagttga
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