Rickettsia prowazekii Madrid E: RP504
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Entry
RP504 CDS
T00018
Symbol
RP504
Name
(GenBank) POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE (pnp)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rpr
Rickettsia prowazekii Madrid E
Pathway
rpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RP504 (RP504)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpr03019
]
RP504 (RP504)
03016 Transfer RNA biogenesis [BR:
rpr03016
]
RP504 (RP504)
Enzymes [BR:
rpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RP504 (RP504)
Messenger RNA biogenesis [BR:
rpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RP504 (RP504)
Transfer RNA biogenesis [BR:
rpr03016
]
Prokaryotic type
tRNA degradation factors
RP504 (RP504)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH_DUF2096_C
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_PDCD11
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
CAA14956
UniProt:
Q9ZD43
LinkDB
All DBs
Position
621154..623391
Genome browser
AA seq
745 aa
AA seq
DB search
MFNEITKSVMWNGQVLEISTGKIARQANAAVTVKMGNSILLCTCVVANKVKDGIGFFPLT
INYREMAYSAGKIPGGFFKREGKASDREILVSRLIDRPIRPLFHQAFMHETHVTCSVLSY
DPATPVDILAIIGASAALSISPAPYLEIVAASKVGLINGEFVLNPTLELLKTSQLDLVVA
GTEDSVMMVESEAHLLSEDKMLEAVKFGFESFQTVIKLIKELAKEAKKPKFEMQDLYPSS
LKKEIEKLFTKEVEQAFEIKSKQERSTDLALIYEKVLTHFVRDIENKKYNNYQIESALKA
ISADILRNKILEKNIRIDGRSTTDIRQIACEVGLLPSAHGSALFTRGETQSLVSTTFGTS
LDEQIVDSLEGEYKERFMLNYIFPPYSVNEAMPMKAPSRREVGHGKLAWRAINPILPNKV
QFPYSIRVVAETTESNGSSSMATVCGSSLALMHAGVPIKAPVAGIAMGLVKESNKFAVLS
DIIGDEDYFGDMDFKVAGTSSGITALQMDIKISGIDFKIIQIALEQARLGRLHILEQMNK
VISKPNSELSKNAPSSTTVKIDKDKIKDIIGPGGKIIKEICETSNAKIDISDDGTVSIYA
SDRDKIKIALDKIKAIAVEPEIGEIFNGTVMKVLDSGAFINYLGNKDGFVHISEISDARI
DKVSSVLKQGDIVKVKLIGFDNKGKAKLTIKNAYKDHSSNNTKQKNNVKDDSESEQRRDT
SKKRTWNEDNNTEMSEVITERKYFT
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaaataactaagagtgtcatgtggaatgggcaagtgcttgagattagtaca
ggtaaaatagcaaggcaagctaatgcagcagttacagtaaaaatgggtaattcaatttta
ttatgtacgtgtgtagtagctaacaaagtgaaagatggtataggatttttccctttaaca
attaattatagagaaatggcatattctgctggtaagataccaggtgggttttttaaacgt
gaagggaaagcatcagatagagaaattttagtatctcgtttaatagatcgaccaattagg
ccattatttcatcaagcttttatgcatgaaacgcatgtaacttgcagtgttctttcatat
gatcctgcaacccctgtagatatacttgcaattataggtgcatctgctgcccttagcata
tcccctgccccttatctagaaatagttgctgccagtaaagtaggtttaatcaatggtgaa
tttgttttaaatcctacacttgaattattaaaaacaagtcagcttgatttagtagtcgca
ggaacagaagattcagttatgatggttgaatcagaagcacatttactctctgaagacaaa
atgttagaagccgtaaaatttggatttgaaagtttccagacagtaatcaagctaattaaa
gaactcgcaaaagaggctaaaaagccaaagtttgaaatgcaagatttatatccttcttca
ttaaagaaagaaatcgagaaattatttacaaaagaagttgaacaagcttttgagataaaa
tctaagcaagaacgtagcactgatttagctttaatatatgaaaaagttcttacacatttt
gtacgtgatatagaaaataaaaaatataataattatcaaattgaatcagctttaaaagct
atttcagcagatatattacgtaataaaattttagaaaaaaatatacgtattgatggaaga
agcacaacagatataagacaaattgcttgtgaagtaggtttattaccgtcagcacacgga
tcagctttatttactagaggtgaaacgcaaagtttagttagtactacatttggtactagt
ttagatgaacagatagttgacagtttagagggtgaatataaagaacgttttatgcttaat
tatatctttcctccctattctgttaatgaagcaatgccaatgaaagcacctagtcgtcgc
gaagtcggacacggtaaacttgcatggcgtgctattaatccaatattacctaataaagta
caatttccttattctattagagtagttgctgaaactactgagtctaacggttcttcttca
atggctactgtttgcggtagttctcttgctttaatgcatgctggcgtgccgataaaagca
ccggttgctggtattgctatgggacttgttaaggaaagtaataaatttgctgtattatcg
gatattatcggtgatgaagattatttcggtgatatggattttaaagttgcaggtactagt
tcagggattactgcattacaaatggatattaaaatatcaggaatagattttaaaataatc
caaatagctttagagcaagcacgactcggtcgtttgcatatactggagcaaatgaataaa
gtgatcagtaaaccaaatagcgaactaagtaaaaatgccccttcttctactactgtaaaa
atagacaaagataaaattaaagatattataggaccaggcggtaaaataataaaggaaatt
tgtgaaactagcaatgctaaaatagatataagcgatgacggaacagtttctatttatgct
tcagatagggataagataaaaattgcattagataaaattaaagcgattgctgttgagcct
gaaatcggtgaaatatttaacggtacggtaatgaaagttttagattctggtgcttttatt
aattatttaggtaataaagacggctttgtgcatattagtgaaatttcagacgcaagaata
gataaggttagcagtgttttaaaacaaggtgatatagtaaaagttaagctaataggcttt
gataataaaggtaaagcaaaactaactattaaaaatgcttacaaagatcactcttcaaat
aatacaaagcaaaaaaataatgttaaagacgattcagaatctgagcaacgacgtgatact
agtaaaaaacgtacttggaatgaagataataatactgaaatgtctgaagtaattacagaa
cgtaaatattttacatag
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