Rickettsia prowazekii Madrid E: RP528
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Entry
RP528 CDS
T00018
Symbol
RP528
Name
(GenBank) SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ (recJ)
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rpr
Rickettsia prowazekii Madrid E
Pathway
rpr03410
Base excision repair
rpr03430
Mismatch repair
rpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RP528 (RP528)
03430 Mismatch repair
RP528 (RP528)
03440 Homologous recombination
RP528 (RP528)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpr03400
]
RP528 (RP528)
DNA repair and recombination proteins [BR:
rpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RP528 (RP528)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RP528 (RP528)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RP528 (RP528)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CAA14977
UniProt:
Q9ZD22
LinkDB
All DBs
Position
complement(651658..653418)
Genome browser
AA seq
586 aa
AA seq
DB search
MKPQISINGKIWKQKPIKEDIVTELCRSFKISDFLARIVSLRVNNLEEVENFLIPKIKNL
LPDPFHLLDMDKAVDRIIQAIVNSQQICIFADYDVDGATSAALLKHFLRDLNIICDIYVP
DRIYEGYGPTPLAMQKIKGNGTELLITVDCGAMAHDALKYAKDVKLDVIVIDHHISTEIL
PDAVAIVNPNRIDETSEYKYLAAVGVTFLFATAILSNLKKRNYFSQSIPTPNLMKYLDLV
ALGTVCDMMKLTGLNRAFVTAGLKVMQQRQNIGIKTLYDIAGLDEIPQCYHLGFILGPRI
NAGGRVGKSNLGANLLATNCHNEANKLANELEKHNNERKVIELLMINEAIDIALTQKDSS
LLFVVKEGWHPGVIGIVAGKLKEKFDKPVVVVALNNGIGKASCRSILGIDFSAEIINAKS
KDLIISGGGHAMAAGFTATASKLQELQDFLNDAFSISINKLASYKHAEYDIDLTVNGVNF
RLMEELKTLEPFGPGNYEPIFKFDDLFILKADIVGSKHIKCMLAPDKQYFGNKALSAIVF
DAVGTPFEDILLSSRARHISAIGTLKMNNWKYNYTIQLIIKDILLK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacaaatatcgataaacggtaaaatatggaaacagaagccaattaaagaagat
atagtaacggaattatgtcgtagttttaaaatcagtgattttcttgctagaatagtatca
ttaagagtaaataatttagaggaagtagaaaattttttgataccgaaaatcaaaaattta
ttacctgatccttttcatctacttgatatggataaggctgttgatagaatcattcaggct
attgtaaatagtcaacaaatctgtatctttgcagattatgacgtagacggtgctacttca
gcagctttacttaaacatttcttacgagatttaaatatcatatgtgatatttatgtgcct
gatcgtatatatgaaggatatggtccaactcctttggctatgcaaaaaattaaaggtaac
ggcactgaattattaattacagttgattgtggtgctatggcacatgatgcgttgaaatat
gcaaaggatgttaaacttgatgttatagtcattgatcatcatatttctactgaaatatta
ccagatgcagtagctatagtaaatccaaatcgtattgatgaaacaagtgaatataaatat
ttggcagcagtaggtgttacgttcttatttgcaactgcaatattatcaaatttaaagaag
cgaaattatttctcgcaaagcataccaactcctaacttaatgaagtatctagatttagtg
gcccttggcactgtttgcgatatgatgaaattaacaggtctaaatcgtgcatttgttaca
gctggattaaaagtaatgcaacaaaggcaaaatatcggtattaaaacattatatgatatt
gcagggcttgatgaaataccgcaatgttatcatttaggctttattttaggtccgcgtatc
aacgcagggggaagagtaggtaaatcaaacttaggtgctaatcttttagctactaattgc
cataatgaagcaaacaaattggctaatgaactggaaaaacataataatgagcgtaaagta
attgaattattaatgatcaacgaggcgatagacattgctttgactcaaaaagacagtagt
ttattatttgttgtgaaagagggatggcatcccggtgttatagggatcgttgcaggaaaa
ttaaaagaaaaatttgataagccagtagtagttgtggctttaaataacggtattggtaaa
gcctcatgtcgttcaattttaggtattgattttagtgctgaaattatcaatgctaaaagt
aaagatttgataatatcaggtggaggtcatgctatggcagcaggatttactgcaactgct
agcaaattacaagaattacaggattttttaaatgatgcttttagcattagtataaataaa
ttagcaagttataaacatgctgaatatgatattgatttaacggttaatggtgtgaatttt
cgtttaatggaggaattaaaaactttagagccttttggtccaggaaattatgaaccaata
tttaaattcgatgatttatttatattaaaagcggatatcgttggaagtaaacatattaaa
tgtatgcttgctccagataaacaatactttggtaataaagcattgtctgctattgtgttt
gatgctgtaggtactccatttgaagatatcttattaagttctcgcgcaagacatatttct
gcaataggaacgttgaaaatgaataattggaaatataattatactattcagttaattata
aaagatatacttttaaaatag
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