Rickettsia prowazekii Katsinyian: M9Y_02180
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Entry
M9Y_02180 CDS
T01792
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rps
Rickettsia prowazekii Katsinyian
Pathway
rps03420
Nucleotide excision repair
rps03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M9Y_02180
03430 Mismatch repair
M9Y_02180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rps03400
]
M9Y_02180
Enzymes [BR:
rps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M9Y_02180
DNA repair and recombination proteins [BR:
rps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M9Y_02180
MMR (mismatch excision repair)
Other MMR factors
M9Y_02180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
AAA_12
DUF87
Motif
Other DBs
NCBI-ProteinID:
AFE50106
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All DBs
Position
546635..548611
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AA seq
658 aa
AA seq
DB search
MKDKIQNQNFMHTLNAEQKKAALHTEGPLLLLAGAGTGKTKVLTSRIANIIHQNLALPHN
ILAVTFTNKAAKEMSERVHNLINCYGLNIGTFHSMAAKILRDQIENLNLGFNNRFTIISH
DDQLTLVKDIVKLKKDIDAKKYTPKLIHIIISRWKDQGLLPNKLSTSDTNLPLQKIAKLV
YEEYQKNLLISNVLDFGDLLLYNNELFIKNPAVLKYYQEKYRYILIDEYQDTNIAQYLWA
RMLASLYRNICCVGDDDQSIYGWRGAEVGNILRFEKDFAGATIIKLEQNYRSTLPILAAA
SNVINNNKNRHSKTLWTDSSSGEKIKIISCLSDKEEARYIACEIDKLVKEERYNAGNIAI
LVRAGFQTRSFEEAFINSAIPYKIIGGLRFYERMEIRDVLAYIRISLNQNDNLALERIIN
VPKRAIGAASLNKIRSYALERNISNFAAIKEILEIGNIKAKSYESLKDLLTKIDNWYEQF
IIDTPINVVKAILDDSGYLAMLKEEKTEEAFGRIENINEMLRAIAEFNDIHDFIEYSSLV
MENEVLETNYGGSVTIMTLHAAKGLEFDVVFLPGWEEGVFPSQRSLDEDGEKGLEEERRI
AYVGITRAKKDLYITHAESRKIFYEIVRSCPSRFINEIPDEITIRTSSMKQYNSFYKF
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataaaatacaaaatcaaaatttcatgcatacattaaatgcagaacagaaaaaa
gcagcacttcacactgaaggtccccttttattgctagcaggcgccggaactggtaaaaca
aaagttcttacatcaagaatagctaatattattcatcaaaatttagccttgcctcataat
attctcgccgttacttttactaataaagccgcaaaagaaatgtctgaaagggtccataac
ttaattaattgctatggtctgaatataggtactttccactcaatggcagctaagatatta
cgtgaccaaatcgagaatttaaatcttggttttaataatagatttactataattagtcat
gatgatcaattaactttagttaaagatatagtaaagctaaaaaaggatattgatgccaaa
aaatatacacctaagttaatacatattattatttcaagatggaaagatcagggattatta
ccaaataaattatcaacatcagatactaatttaccactacagaaaatagcaaaacttgta
tacgaagaatatcaaaaaaatttacttatttctaatgttttagactttggagatctttta
ctttataacaatgaactttttattaaaaatcctgcagtactaaaatattaccaagaaaaa
tatcgatatattttaatcgatgaatatcaagatactaacattgcgcaatatttatgggca
agaatgctagcaagtttatataggaatatttgttgtgtaggcgatgatgatcaatctatt
tatggttggcgcggagcagaagtcgggaatatactacgttttgaaaaagattttgcaggt
gcaacgattattaaattagaacagaattatagatcaaccttgccaatacttgctgctgct
tccaatgttatcaataataataaaaatcgtcacagtaaaacgctatggacggacagctca
agtggtgaaaagataaaaattatttcttgtttaagtgataaagaagaagcaagatatata
gcatgtgaaatagataagttagttaaagaagaaaggtataatgctggcaatattgcaata
ttagtacgcgcggggtttcaaacaagaagttttgaggaagcttttataaatagtgctata
ccttataaaattataggcggtttacgattctatgaacgtatggaaataagagacgtactt
gcttatatccgtatatctttgaatcaaaatgacaatctagcacttgagcgtattatcaat
gtgccaaaaagagcaataggtgcagctagcctaaataaaattagatcttatgcacttgaa
cgcaatatttctaattttgcagcaattaaagaaatactagaaataggtaatattaaagca
aaatcatatgaatctctaaaagatttacttactaaaattgataattggtatgaacaattt
attatagataccccaataaacgtagttaaagcaatacttgatgattctggttatcttgca
atgctgaaagaagaaaaaactgaagaagcatttggtagaattgaaaatattaatgagatg
cttagagctattgcagaatttaatgatattcatgattttatcgaatattcaagcttagtt
atggaaaatgaagtacttgaaactaattacggtggatctgtgactataatgacactgcac
gcagctaagggactcgaatttgatgtagtatttttacctggatgggaagaaggtgtattt
ccttctcaaagatctctagatgaagatggagaaaaaggcttagaagaagaacgacgtatc
gcttatgttggtattacgagagcaaaaaaagatctttatattactcacgcggaaagcaga
aaaatattttatgaaatagtacgctcttgcccttcaaggttcataaatgaaattcctgat
gaaattacgattagaacatcttctatgaagcaatacaattctttttataagttttga
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