Rickettsia prowazekii Katsinyian: M9Y_02540
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Entry
M9Y_02540 CDS
T01792
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rps
Rickettsia prowazekii Katsinyian
Pathway
rps03410
Base excision repair
rps03430
Mismatch repair
rps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M9Y_02540
03430 Mismatch repair
M9Y_02540
03440 Homologous recombination
M9Y_02540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rps03400
]
M9Y_02540
DNA repair and recombination proteins [BR:
rps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
M9Y_02540
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M9Y_02540
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M9Y_02540
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFE50176
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Position
complement(651655..653415)
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AA seq
586 aa
AA seq
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MKPQISINGKIWKQKPIKEDIVTELCRSFKISDFLARIVSLRVNNLEEVENFLIPKIKNL
LPDPFHLLDMDKAVDRIIQAIVNSQQICIFADYDVDGATSAALLKHFLRDLNIICDIYVP
DRIYEGYGPTPLAMQKIKGNGTELLITVDCGAMAHDALKYAKDVKLDVIVIDHHISTEIL
PDAVAIVNPNRIDETSEYKYLAAVGVTFLFATAILSNLKKRNYFSQSIPTPNLMKYLDLV
ALGTVCDMMKLTGLNRAFVTAGLKVMQQRQNIGIKTLYDIAGLDEIPQCYHLGFILGPRI
NAGGRVGKSNLGANLLATNCHNEANKLANELEKHNNERKVIELLMINEAIDIALTQKDSS
LLFVVKEGWHPGVIGIVAGKLKEKFDKPVVVVALNNGIGKASCRSILGIDFSAEIINAKS
KDLIISGGGHAMAAGFTATASKLQELQDFLNDAFSISINKLASYKHAEYDIDLTVNGVNF
RLMEELKTLEPFGPGNYEPIFKFDDLFILKADIVGSKHIKCMLAPDKQYFGNKALSAIVF
DAVGTPFEDILLSSRARHISAIGTLKMNNWKYNYTIQLIIKDILLK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacaaatatcgataaacggtaaaatatggaaacagaagccaattaaagaagat
atagtaacggaattatgtcgtagttttaaaatcagtgattttcttgctagaatagtatca
ttaagagtaaataatttagaggaagtagaaaattttttgataccgaaaatcaaaaattta
ttacctgatccttttcatctacttgatatggataaggctgttgatagaatcattcaggct
attgtaaatagtcaacaaatctgtatctttgcagattatgacgtagacggtgctacttca
gcagctttacttaaacatttcttacgagatttaaatatcatatgtgatatttatgtgcct
gatcgtatatatgaaggatatggtccaactcctttggctatgcaaaaaattaaaggtaac
ggcactgaattattaattacagttgattgtggtgctatggcacatgatgcgttgaaatat
gcaaaggatgttaaacttgatgttatagtcattgatcatcatatttctactgaaatatta
ccagatgcagtagctatagtaaatccaaatcgtattgatgaaacaagtgaatataaatat
ttggcagcagtaggtgttacgttcttatttgcaactgcaatattatcaaatttaaagaag
cgaaattatttctcgcaaagcataccaactcctaacttaatgaagtatctagatttagtg
gcccttggcactgtttgcgatatgatgaaattaacaggtctaaatcgtgcatttgttaca
gctggattaaaagtaatgcaacaaaggcaaaatatcggtattaaaacattatatgatatt
gcagggcttgatgaaataccgcaatgttatcatttaggctttattttaggtccgcgtatc
aacgcagggggaagagtaggtaaatcaaacttaggtgctaatcttttagctactaattgc
cataatgaagcaaacaaattggctaatgaactggaaaaacataataatgagcgtaaagta
attgaattattaatgatcaacgaggcgatagacattgctttgactcaaaaagacagtagt
ttattatttgttgtgaaagagggatggcatcccggtgttatagggatcgttgcaggaaaa
ttaaaagaaaaatttgataagccagtagtagttgtggctttaaataacggtattggtaaa
gcctcatgtcgttcaattttaggtattgattttagtgctgaaattatcaatgctaaaagt
aaagatttgataatatcaggtggaggtcatgctatggcagcaggatttactgcaactgct
agcaaattacaagaattacaggattttttaaatgatgcttttagcattagtataaataaa
ttagcaagttataaacatgctgaatatgatattgatttaacggttaatggtgtgaatttt
cgtttaatggaggaattaaaaactttagagccttttggtccaggaaattatgaaccaata
tttaaattcgatgatttatttatattaaaagcggatatcgttggaagtaaacatattaaa
tgtatgcttgctccagataaacaatactttggtaataaagcattgtctgctattgtgttt
gatgctgtaggtactccatttgaagatatcttattaagttctcgcgcaagacatatttct
gcaataggaacgttgaaaatgaataattggaaatataattatactattcagttaattata
aaagatatacttttaaaatag
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