Rhodococcus pseudokoreensis: JWS13_06500
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Entry
JWS13_06500 CDS
T08508
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
JWS13_06500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpsk03400
]
JWS13_06500
DNA repair and recombination proteins [BR:
rpsk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
JWS13_06500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QSE88292
LinkDB
All DBs
Position
253732..254628
Genome browser
AA seq
298 aa
AA seq
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MERMRSIWKGSIAFGLVNVPVKVYSATEDHDIRFHQVHAKDGGRIKYNRVCSECGNVVQY
ADIDKAYDSDDGVRVVLTDDDFGKLPAAEKHEIPVLQFVPTEQIDPILFEKSYFLEPDSS
SPKAYVLLATALENSDRTALVHFTLRQRTRLAAMRSRDGVLVIQTLLWPDEVRAAEFSSL
DDVEKPKAKELAMAETLVDSMADDFDPTEFTDDYQVQLRELLDEMIESGGKKVIPVAEVE
KSGEDAEVVDLVAALQRSVDAAGKKAAPAKKKPAKKAPAKTAAKKATAKSSTSERKRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcatgcggtcgatatggaagggctcgatagcgttcggactcgtgaacgtgccg
gtcaaggtctattcggcaaccgaagatcacgacatcagatttcaccaggtccatgccaag
gacggcggccggatcaaatacaaccgcgtgtgctccgaatgcggcaacgtcgtccaatat
gccgatatcgacaaggcctacgactccgacgacggcgtccgggtggtgttgaccgacgac
gatttcggcaagttacccgccgccgagaaacacgagattcccgttctgcagttcgtgccg
accgaacagatcgatcccattctgttcgagaagagttactttctcgaaccggattccagc
tcgccgaaggcctatgtcctactcgcaacggccctcgaaaacagcgaccggaccgcgctc
gttcatttcacgctccgtcagcgcaccagactggccgcgatgcgctcgcgggacggggtg
ctggtgatccagacgctgctgtggccggacgaggtacgcgcggccgagttctcgtcactc
gacgacgtcgagaagccgaaggcgaaggaactcgcgatggccgagaccctcgtcgacagc
atggccgacgacttcgaccccaccgaattcaccgacgactaccaggtgcagttgcgtgaa
ctgctcgacgagatgatcgagtcgggcggcaagaaggtcattcccgtcgccgaggtcgag
aagagcggcgaggacgccgaagtggtggatctcgtggccgcgctgcagcgcagcgtcgat
gcggccgggaagaaggccgcacccgccaagaagaagccggccaagaaggccccggccaaa
accgcggcgaagaaggccaccgcgaagtcgtccacctcggaacgcaaacgcgcctga
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