Rhodococcus pseudokoreensis: JWS13_07255
Help
Entry
JWS13_07255 CDS
T08508
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rpsk
Rhodococcus pseudokoreensis
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpsk03016
]
JWS13_07255
Enzymes [BR:
rpsk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JWS13_07255
Transfer RNA biogenesis [BR:
rpsk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JWS13_07255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QSE88425
LinkDB
All DBs
Position
410087..411373
Genome browser
AA seq
428 aa
AA seq
DB search
MSEVTDDASSPVPAEEPGRQVVPLLAPRDGVPDVVTTAEGVAKAAAALSEGTGPLAVDAE
RASGFRYSARAYLVQLRREGAGTVLLDPIPTAADLAPLAEVINPLEWILHSADQDLPGLA
EIGLAPATLFDTELAGRLAGFERVGLAAIVERTLGLELRKGHGAADWSKRPLPDTWLNYA
ALDVEVLVELRNVMAAELEEQGKSDWAAQEFEHIRLAGPPRPKPDRWRRTSHITSLKTQR
QLAAARSLWQAREDLARKRDVSPSRVLPDSAIIDAATKDPRSIEALRALPVFGGPRQRRH
SRIWLQALEDARALPDSELPPKTPPFTGPPPASRWARHDPDAAERLTAARAALAALGAEV
SVPVENLVTPELVRRLCWDWAAPEDGPEAAIDRVLEAGGARPWQRMLTVPRLATALRAAA
EQKGSGDD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagtcaccgacgacgcctcgtctcccgtccccgccgaagaacccggcaggcag
gtagtacccctgctcgcaccccgggacggcgtacccgacgtggtgaccaccgcggagggt
gtcgcgaaggccgcggccgcactgagcgagggcaccgggccgctggcggtcgacgccgag
cgggcgtccggcttccgctattcggcgcgggcgtatctcgtgcagctgcgccgggagggc
gcggggacggtgctcctcgacccgatccccaccgccgccgatctcgccccgctggcggag
gtgatcaacccgctggagtggatcctgcactccgccgaccaggatctgccgggtctcgcg
gaaatcggtctggcgccggcgacgctgttcgacaccgaactcgcggggcgcctcgccggg
ttcgagcgggtcggcctcgccgcaatcgtcgagcggacgctgggcctcgaactgcggaag
gggcacggcgccgccgactggtcgaagcggccgctgcccgacacgtggctgaactacgca
gccctcgacgtcgaggttctggtcgagttgcggaacgtgatggccgcggaactcgaggag
cagggcaagagcgactgggcggcacaggaattcgagcacatccggctcgccgggccaccg
cggcccaagcccgaccgctggcgccggacgtcgcacatcacgtcgctgaagacgcagcgg
caactcgccgccgcgcgctccctgtggcaggcccgcgaggacctggcccgcaaacgcgac
gtctcccccagccgggtgcttccggattcggcgatcatcgacgccgcgacgaaggacccc
cgcagcatcgaggcgctgcgggcgctgccggtgttcggcggtccccggcagcggcggcat
tcccggatctggctgcaggcgctcgaagatgcccgggcgctgccggactccgaactcccc
ccgaagaccccgccgttcacgggccccccgcccgcgagccggtgggcgcggcacgatccc
gacgcagcggaacgactgacggcggcccgcgccgcgctggccgctctcggggcggaggtc
tcggtgccggtggagaacctggtgaccccggaactcgtccgcaggctgtgctgggactgg
gcggctcccgaggacggccccgaggcggcgatcgaccgggtgctcgaggcgggcggggcg
cgaccgtggcagcggatgctgaccgtgccccggctggcgaccgcgctgcgcgccgcggcc
gagcagaagggctccggcgacgactga
DBGET
integrated database retrieval system
