Rhodococcus pseudokoreensis: JWS13_07665
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Entry
JWS13_07665 CDS
T08508
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rpsk
Rhodococcus pseudokoreensis
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpsk03016
]
JWS13_07665 (miaB)
Enzymes [BR:
rpsk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
JWS13_07665 (miaB)
Transfer RNA biogenesis [BR:
rpsk03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
JWS13_07665 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QSE88499
LinkDB
All DBs
Position
complement(501721..503238)
Genome browser
AA seq
505 aa
AA seq
DB search
MDTIDQTPHRSYEVRTYGCQMNVHDSERLSGLLEDAGYTKAAAGQSPDLVVFNTCAVREN
ADNKLYGNLSHLAPAKEQNPDMQIAVGGCLAQKDRDVVVKKAPWVDVVFGTHNIGSLPAL
LDRARHNQRAEVEILDALEAFPSTLPAKRESAYAGWVSISVGCNNTCTFCIVPALRGKEV
DRRPGDILAEVQALVNEGVVEVTLLGQNVNAYGVSFADPDQPRDRGAFAALLRACGDVDG
LERVRFTSPHPAEFTDDVIEAMAETPNVCPQLHMPLQSGSDRVLKAMRRSYRKSRFLGII
EKVRTAMPHAAITTDIIVGFPGETEEDFQDTLDVVRQARFTSAFTFQYSKRPGTPAADMD
DQLPKAVVQERYERLIALQEQITLEENQKLVGAEVELLVAAGEGRKNAETARMSGRARDG
RLVHFRPEGNLDGNVRPGDVVTIVISAAAPHHLVADTPVLTHRRTRAGDSFEKGVTPKTP
PIGVGLGLPQIGAPAPLPAQMGCNA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
gtggacacgatcgaccagacccctcaccgcagctacgaggtgcgcacgtacggctgccag
atgaacgtgcacgactccgagcggttgtcggggctcctcgaggacgccggctacacgaag
gcggccgccgggcaatcgccggacctcgtcgtcttcaacacctgcgcggtacgggagaac
gccgacaacaagctgtacggcaacctgagccatctggcgccggcgaaggaacagaatccc
gacatgcagatcgcggtcggcgggtgcctggcgcagaaggaccgcgacgtcgtcgtgaag
aaggcgccgtgggtggacgtcgtgttcggcacccacaacatcgggtcgctcccggcgctg
ctggaccgggcgcgccacaatcagcgggccgaggtcgagatcctcgacgcgctcgaggcg
tttccgtcgacgctgcccgccaagcgggagtcggcgtacgccggctgggtgtccatctcg
gtgggatgcaacaacacgtgcacgttctgcatcgtgcccgcgctgcgcggcaaggaggtc
gaccggcggcccggcgacatcctggccgaggtgcaggccctggtgaacgagggcgtcgtc
gaggtgacgctgctcgggcagaacgtcaacgcgtacggcgtgtcgttcgccgaccccgac
cagccccgcgaccggggcgcgttcgccgcgctgctgcgtgcgtgcggcgacgtcgacggg
ctcgagcgcgtccgcttcacctcgccgcacccggccgagttcaccgacgacgtcatcgag
gcgatggccgagacccccaacgtgtgccctcagctgcacatgccgctgcaatccggttcg
gaccgcgtcctcaaggcgatgcgtcgctcctaccggaagtcgcggttcctggggatcatc
gagaaggtccgcaccgcgatgccgcacgcggcgatcaccaccgacatcatcgtggggttc
cccggtgagaccgaggaagacttccaggacacgctcgacgtcgtccggcaggcgcgcttc
accagcgcgttcaccttccagtactccaagcggcccggcaccccggcagcggacatggat
gaccagctgcccaaggccgtcgtgcaggaacggtacgaacgtctcatcgcgttgcaggaa
cagatcacgctcgaggagaaccagaagctcgtcggcgccgaggtggaactgctcgtcgcc
gccggggagggccgcaagaacgcggagaccgcccggatgagcgggcgcgcccgcgacggc
cggctcgtccacttccggccggagggaaacctcgacggaaacgtccggcccggcgacgtc
gtcaccatcgtgatcagcgccgccgccccgcaccacctcgtcgcggacaccccggtcctg
acccaccgccgcacccgcgcaggcgactccttcgagaagggcgtcaccccgaagaccccg
ccgatcggagtgggactcggactgccgcagatcggtgcgcccgcaccactacccgctcag
atgggatgcaacgcatga
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