Rhodococcus pseudokoreensis: JWS13_08025
Help
Entry
JWS13_08025 CDS
T08508
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rpsk
Rhodococcus pseudokoreensis
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpsk03016
]
JWS13_08025 (truB)
Enzymes [BR:
rpsk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JWS13_08025 (truB)
Transfer RNA biogenesis [BR:
rpsk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JWS13_08025 (truB)
Prokaryotic type
JWS13_08025 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
LPP
Motif
Other DBs
NCBI-ProteinID:
QSE88563
LinkDB
All DBs
Position
complement(567272..568189)
Genome browser
AA seq
305 aa
AA seq
DB search
MSAREKPSSGLVGAGLLIVDKDAGVTSHDVVARCRKLLGTRKVGHAGTLDPMATGVLVLG
IERATKLLGLLALTTKAYTATIRLGQATTTDDAEGDVVASADASGVRDEEIAAQVRTLTG
DIQQIPSSVSAIKVDGRRAHALIRAGEEFELAPRSVTVSRFEVIARRTEGTFVDLDVEVE
CSSGTYVRALARDLGIALIGVGGHLTSLRRTRVGPFTLEHARTLEQLAEEPGVSLDIDAA
AQTAFPHRQIDADEAEAISQGRWLEPIGIKGVYAAIDPSGHTIALLQERGKRASSVMVVR
PATLR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgcacgtgaaaagccctcttccggtctcgtcggcgccggactgctcatcgtcgac
aaggacgcaggcgtcaccagccacgacgtggtggcccggtgccgcaagctgctcggcacc
cggaaggtcggccacgcgggcactctggatccgatggctaccggggtgctggtgctcggt
atcgagcgggcgacgaagctactggggcttctcgcgctgaccaccaaggcgtacacggcc
acgatccggttggggcaggccaccacgaccgacgacgccgagggtgacgtcgtcgcgtcg
gccgatgcgtccggcgtgagggatgaggagatcgcggcgcaggtgcgcaccctcaccgga
gacatccagcagatcccgtcgagcgtcagcgccatcaaggtggacggccggcgggcgcac
gcgctgatccgggcgggagaggagttcgaactcgctccccggtcggtgacggtgtcccgg
ttcgaggtgatcgccaggcgcaccgagggcacgttcgtcgacctcgacgtcgaggtggaa
tgttcgtccggaacctatgtgcgggcgctcgcacgtgatctggggatcgcgttgatcggc
gtcggcgggcatctcacgtcgctgcgacggacccgggtgggtccgttcaccctcgagcac
gcgcgcacgctggaacagctggccgaggagccgggtgtcagtctcgacatcgacgccgcc
gcgcagaccgcgttcccgcaccggcagatcgacgcggacgaggccgaagcgatcagtcag
ggccgctggctcgaaccgatcggcatcaagggtgtctacgccgcgatcgatccgagtgga
cacacgatcgcgctgctccaggagcggggaaagcgggcgagttcggtgatggtcgtccgt
cccgcgaccctgaggtag
DBGET
integrated database retrieval system
