Rhodococcus pseudokoreensis: JWS13_08510
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Entry
JWS13_08510 CDS
T08508
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk02024
Quorum sensing
rpsk03060
Protein export
rpsk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JWS13_08510 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JWS13_08510 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JWS13_08510 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rpsk02044
]
JWS13_08510 (ffh)
Enzymes [BR:
rpsk01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JWS13_08510 (ffh)
Secretion system [BR:
rpsk02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JWS13_08510 (ffh)
Eukaryotic Sec-SRP protein
JWS13_08510 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
TctA
APS_kinase
AAA_22
ArsA_ATPase
Zeta_toxin
AAA_31
AAA_16
AAA_18
NPHP3_N
AAA_33
AAA_24
MeaB
MobB
NTPase_1
Thymidylate_kin
CLP1_P
NACHT
ATP_bind_1
6PF2K
TsaE
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QSE88649
LinkDB
All DBs
Position
complement(659645..661234)
Genome browser
AA seq
529 aa
AA seq
DB search
MFESLSDRLTGALKDLRGKGRLSGADIDATCREIRLALLEADVALPVVRSFIAKIKERAK
GVEVSAALNPAQQVVKIVNEELVGILGGETRRLVFAKTPPTVIMLAGLQGSGKTTLAGKL
AKWLRDQGHTPLLVACDLQRPGAVTQLQIVGERAGATVFAPHPGTSIGGGDNELGITAAD
PVEVARAGVEEARNKQFDVVIVDTAGRLGIDADLMAQAAGIRDAVNPDETIFVLDAMIGQ
DAVSTAEAFREGVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASTGEKLEDFDIFHP
DRMASRILGMGDVLSLIEQAEQVFDQKQAEATAQKIGSGQLTLEDFLEQMMAVRKMGPIG
NLLGMLPGAGQMKDALANVDEKQLDRVQAIIRGMTPAERDDPKIINASRRLRIANGSGVK
VSDVNQLVDRFFEARKMMAAMAGRMGMPGARKPQRSSKKGKKGKKGGKGPTPPKVRGGFP
GGLPGGFPGMPPGGLPAGMPDLSNMPKGLDELPPGLEGIDLSQLKLPKK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaatccctttccgacaggttgaccggagccctcaaggatctgcgtggcaagggt
cgcctttccggagccgacatcgatgccacctgccgtgagatccggttggccctgctcgag
gcagacgtcgcgctgcccgtcgtccgctcgttcatcgccaagatcaaggaacgcgccaag
ggcgtcgaggtctcggcggcgctgaacccggcgcagcaggtcgtcaagatcgtcaacgag
gaactcgtcgggatcctcggtggcgagacccgccggctggtgttcgccaagacgccgccg
acggtcatcatgctcgccggtctgcagggttccggtaagaccaccctcgcgggcaagctc
gcgaagtggctgcgcgaccaggggcacaccccgctgctcgttgcctgcgacctgcagcgt
cccggcgccgtcacccagctgcagatcgtcggtgagcgcgccggagccacggtgttcgcg
ccgcacccgggcacgtccatcggcggcggcgacaacgagctgggcatcaccgcggccgac
ccggtcgaggtggcccgggccggtgtcgaggaagcccgcaacaagcagttcgacgtggtc
atcgtcgacaccgcgggtcgcctgggtatcgacgccgacctgatggcgcaggccgcgggc
atccgcgacgccgtgaaccccgacgagacgatcttcgtcctcgacgcgatgatcggtcag
gacgcggtcagcaccgccgaggcgttccgcgagggtgtcggattcaccggtgtcgtgctc
acgaagctcgacggcgacgcccgtggtggcgccgcgctcagcgttcgcgaggtcaccggg
cagcccatcctgttcgcgtccacgggtgagaagctcgaagacttcgacatcttccacccc
gaccgcatggccagccgcatcctcggcatgggtgacgtgctcagcctcatcgagcaggcg
gagcaggtcttcgaccagaagcaggccgaggccaccgcgcagaagatcggctccggccag
ctgaccctcgaagacttcctcgagcagatgatggccgtccgcaagatgggtcccatcggc
aacctcctgggcatgctcccgggtgcggggcagatgaaggacgctctcgcgaacgtcgac
gagaagcagctcgaccgggtgcaggcgatcatccgcggtatgacccccgccgagcgcgac
gacccgaagatcatcaacgcctcccgcaggctgcggatcgccaacggttccggcgtgaag
gtctccgacgtcaaccagctcgtggaccgcttcttcgaggcccgcaagatgatggccgcg
atggccgggcgcatgggcatgccaggtgcgcgcaagccgcagcgcagcagcaagaagggc
aagaagggcaagaagggtggcaagggaccgacgccgccgaaggtgcgcggaggattcccc
ggtggcctgcccggcgggttcccggggatgccgcccggaggtctccccgcggggatgccc
gacctgtcgaacatgccgaagggcctcgacgagttgccgcccggactcgagggcatcgac
ctgtcccagctgaagctgccgaagaagtag
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