Rhodococcus pseudokoreensis: JWS13_08620
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Entry
JWS13_08620 CDS
T08508
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JWS13_08620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpsk03400
]
JWS13_08620
Enzymes [BR:
rpsk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JWS13_08620
DNA repair and recombination proteins [BR:
rpsk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JWS13_08620
Prokaryotic type
JWS13_08620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QSE95335
LinkDB
All DBs
Position
complement(686718..687395)
Genome browser
AA seq
225 aa
AA seq
DB search
MMAAPLSDLVEAGWAEALEPVSGRITEMGEFLRAEIADGREYLPAGENVLRAFTHPFSEV
KVLIVGQDPYPTPGHAVGLSFSVAPEVRPVPRSLGNIFTEYSKDLGYQTPTTGDLTPWSR
QGVLLLNRVLTVQPGLPASHRKKGWEAVTEQAIRALVARPEPLVAILWGRDASTLKPMLG
DVPTIESAHPSPLSASRGFFGSRPFSRANELLEGLGAEPVNWQLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
ctgatggcggcgccgctgtcggacctcgtcgaggccggatgggccgaggcactcgagccg
gtgtccggacggatcacggagatgggcgaattcctgcgcgcagaaatcgccgacggtcgt
gagtacctccccgccggtgagaacgtcctgagggcgttcacccacccgttctccgaggtc
aaggtcctgatcgtgggccaggacccgtaccccacacccggtcacgccgtcggtctcagc
ttctcggtcgctccggaggtgaggccggttccgcgcagcctcggcaacatcttcaccgag
tacagcaaggacctcggctaccagacgccgaccaccggcgacctcaccccgtggtcccgc
cagggtgtgctcctgctgaacagggtcctcaccgtgcagccgggactcccggcctcgcac
cggaagaagggctgggaggcagtgaccgaacaggccattcgcgctctcgtggcgcgcccc
gaacccctcgttgcgattctgtggggccgggacgcgtccaccctgaaaccgatgctcggc
gacgtgccgacgatcgagtcggcgcacccctcaccgttgtcggcgtcgcgcggattcttc
ggttcgcggccgttcagccgcgcgaacgaactcctcgaaggcttgggcgcggaaccggtg
aactggcagctgccgtaa
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