Rhodococcus pseudokoreensis: JWS13_09930
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Entry
JWS13_09930 CDS
T08508
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk00020
Citrate cycle (TCA cycle)
rpsk00190
Oxidative phosphorylation
rpsk00650
Butanoate metabolism
rpsk00720
Other carbon fixation pathways
rpsk01100
Metabolic pathways
rpsk01110
Biosynthesis of secondary metabolites
rpsk01120
Microbial metabolism in diverse environments
rpsk01200
Carbon metabolism
Module
rpsk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpsk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rpsk_M00149
Succinate dehydrogenase, prokaryotes
rpsk_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JWS13_09930
00650 Butanoate metabolism
JWS13_09930
09102 Energy metabolism
00190 Oxidative phosphorylation
JWS13_09930
00720 Other carbon fixation pathways
JWS13_09930
Enzymes [BR:
rpsk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JWS13_09930
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
DAO
Pyr_redox_2
FAD_oxidored
DUF6020
Motif
Other DBs
NCBI-ProteinID:
QSE88902
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All DBs
Position
954236..955987
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AA seq
583 aa
AA seq
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MQEHRYDVVIVGAGGAGMRAAIEAGPRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLADQDAVEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFFNEFYALDIAITETENGPVATGV
IAYELATGEIHVFHAKSIVFATGGSGRMYKTTSNAHTLTGDGMGIIFRKGLPLEDMEFHQ
FHPTGLAGLGILISEAVRGEGGILRNADGERFMERYAPTIKDLAPRDIVARSMVLEVLEG
RGAGPNKDYVYIDVTHIPEEVLDEKLPDIMEFSRTYLGVDPVKEPVPVYPTCHYVMGGIP
TRINGEVLRNNDEIVQGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAAEHANN
SEFVALPETPEKMVDEWMETILSDHGHERVADIRTELQQSMDNNASVFRTEERLTQALKD
VRALKERYNHITVQDKGKRYNSDLLEAVELGFLLEMAEVTVVGALNRKESRGGHAREDFP
DRNDAEYMKHTMAYKEGDGLLSDIRLDYKPVVQTRYEPMERKY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacaccgttatgacgtggtcatcgtcggtgccggcggcgccggcatgcgcgca
gcgatcgaggccggtccccgcgcccgcaccgcggtactgaccaagctctaccccacccgc
agccacaccggcgcggcccagggcggcatgtgcgccgcgctggcgaacgtggaggaagac
aactgggagtggcacaccttcgacacggtcaagggcggcgactacctcgccgaccaggac
gccgtcgagatcatggccaaggaggccatcgacgcggtgctcgacctcgagaagatgggt
ctgccgttcaaccgcacgcccgagggcaagatcgaccagcgtcgtttcggtggtcacacc
cgcgatcacggtaaggcccccgttcgccgcgcatgttatgccgcggaccgcaccggtcac
atgatcctgcagacgctctaccagaactgcgtcaagcacgacgtcgagttcttcaacgag
ttctacgccctcgacatcgcgatcaccgagacggagaacggccccgtcgccaccggtgtc
atcgcctacgagctggccaccggcgagatccacgtcttccacgcgaagtccatcgtgttc
gccaccggcggctcgggacgcatgtacaagacgacgtccaacgcccacaccctcaccggt
gacggcatgggcatcatcttccgcaagggcctcccgctggaggacatggagttccaccag
ttccatccgacaggcctggccgggctcggcatcctcatctccgaggctgtgcgcggtgag
ggcggcatcctccgcaacgccgacggcgagcggttcatggagcgctacgcccccaccatc
aaggacctcgcaccccgtgacatcgtcgcgcggtcgatggttctcgaggtcctcgaggga
cgcggcgcgggaccgaacaaggattacgtctacatcgacgtgacccacatccccgaggaa
gtcctcgacgagaagctccccgacatcatggagttctcccgcacctacctcggtgtggac
ccggtcaaggaaccggtgccggtgtaccccacctgccactacgtcatgggcggcatcccc
accaggatcaacggtgaggtcctccgcaacaacgacgagatcgtccagggcctgtacgcc
gccggcgagtgcgcctgcgtctccgtccacggcgcgaaccgtctcggcaccaactcgctg
ctcgacatcaacgtcttcggacgccgcgccggcatcgccgccgccgagcacgccaacaac
agcgagttcgtcgccctgccggagacgcccgagaagatggtcgacgagtggatggaaacc
atcctgtcggaccacggtcacgagcgggtcgcggacatccgcaccgagctgcagcagtcg
atggacaacaacgcctcggtgttccgcacggaagagcgcctcacccaggcactcaaggac
gtgcgcgctctgaaggagcgctacaaccacatcacggtgcaggacaagggcaagcgctac
aacagcgacctgctcgaggccgtcgagctcggcttcctcctcgaaatggcggaggtcacc
gtcgtcggcgcgctgaaccgcaaggaatcgcgcggcggccacgcccgcgaggacttcccg
gaccgcaacgacgccgagtacatgaagcacacgatggcatacaaggagggcgacggcctg
ctctccgacatccgtctcgactacaagccggtagtccagacccgctacgagccgatggag
cgtaagtactga
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