Rhodococcus pseudokoreensis: JWS13_11120
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Entry
JWS13_11120 CDS
T08508
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk00250
Alanine, aspartate and glutamate metabolism
rpsk00410
beta-Alanine metabolism
rpsk00430
Taurine and hypotaurine metabolism
rpsk00650
Butanoate metabolism
rpsk01100
Metabolic pathways
rpsk01110
Biosynthesis of secondary metabolites
rpsk01120
Microbial metabolism in diverse environments
rpsk02024
Quorum sensing
Module
rpsk_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JWS13_11120
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JWS13_11120
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JWS13_11120
00430 Taurine and hypotaurine metabolism
JWS13_11120
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JWS13_11120
Enzymes [BR:
rpsk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
JWS13_11120
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QSE89123
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Position
complement(1231804..1233189)
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AA seq
461 aa
AA seq
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MSKHHHHHHRDVISPAYTGRLSIDPFPALRLPDDETDPEATYRFIHDELMLDGSSRLNLA
TFVTTWMDPEADKLMAETFDKNMIDKDEYPATAAIESRCVSMVADLFHAPDLSTTDPASA
TGVSTIGSSEAVMLGGLALKWRWRAKQEAAGKDTARPNLVLGSNVQVVWEKFCRYFDVEP
KYLPMEKGRYVITPEQVRDAVDENTIGAIVIVGTTYTGELEPVAEIAAALDALAASGGPD
VPIHVDAASGGFVVPFLQPELLWDFRVPRVASINVSGHKYGLTYPGIGFVVWREREYLPE
GLVFRVNYLGGDMPTFTLNFSRPGNQVVGQYYNFLRLGRAGYRSIMETLRDTAVRVGKRI
AELEYFSLITDGTDIPVLAFELVGDPGFTVFDVSHEMRARGWQVPAYTMPADAEDVAVLR
IVVREGFSADLGTLVAEAIEEVCAELAEKGGGHSTEQHFAH
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcaccatcatcatcaccatcgcgacgtcatttctcccgcgtacaccgggcgc
ctgtcgatcgacccgtttccggcgttgcggttgccggacgacgagaccgatcccgaggcc
acgtaccggttcatccacgacgagttgatgctcgacggcagttcccggttgaacctggcc
acgttcgtcaccacgtggatggatcccgaggccgacaagttgatggccgagacgttcgac
aagaacatgatcgacaaggacgagtaccccgcgacggcggcgatcgagtcccgttgcgtg
tcgatggtggccgatctgttccatgcccccgacctgtcgaccaccgacccggccagcgcc
accggcgtctcgacgatcggttccagtgaggcggtgatgctcggtggtctcgcgctcaag
tggcggtggcgggcgaagcaggaggcggccgggaaggacacggcccggccgaatctggtg
ctcggcagcaacgtccaggtggtgtgggagaagttctgccggtacttcgacgtcgagccc
aagtacctgccgatggagaagggccgttacgtcatcacgccggagcaggtgcgggacgcg
gtcgacgagaacaccatcggtgcgatcgtgatcgtgggcaccacctataccggggaactc
gagccggtggccgagatcgcggcagctctcgacgcgctcgccgcgtccggcggcccggac
gtcccgatccacgtggacgcggcgagcggtggcttcgtcgtccccttcctgcaaccggag
ttgttgtgggacttccgggttccgcgcgtcgcgtcgatcaatgtgagtggtcacaagtac
gggttgacgtatccggggatcgggttcgtggtgtggcgtgagcgtgagtacctgcccgag
gggctggtgttccgggtcaactacctgggcggcgacatgccgacgttcaccctcaacttc
tcgcggcccggcaatcaggtggtgggccagtactacaacttcctgcggctcggccgggcc
ggctaccggtcgatcatggagacgctgcgcgacaccgcggtccgcgtcggcaaacgcatc
gcggagctcgaatacttcagcctgatcacggatgggaccgacatcccggtgctggcgttc
gagttggtcggcgatcccgggttcacggtcttcgacgtgtcacacgagatgcgggcgcgg
gggtggcaggtccccgcgtacacgatgcccgccgacgcggaggacgtggcggttctgcgc
atcgtcgtgcgcgagggcttcagcgccgacttggggacgctcgtcgccgaggcgatcgag
gaagtgtgcgccgaactcgccgagaagggcggcgggcattcgacggaacagcacttcgcc
cactag
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