Rhodococcus pseudokoreensis: JWS13_11815
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Entry
JWS13_11815 CDS
T08508
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rpsk
Rhodococcus pseudokoreensis
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpsk03400
]
JWS13_11815
DNA repair and recombination proteins [BR:
rpsk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JWS13_11815
Archaeal homologous recombinant proteins
JWS13_11815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
EndA_linker
Motif
Other DBs
NCBI-ProteinID:
QSE89254
LinkDB
All DBs
Position
complement(1381402..1382586)
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AA seq
394 aa
AA seq
DB search
MRILHTSDWHIGRTFHGVDLLTDQARVLDAIAALVAEHGVDVVVVPGDVYDRSIPSADAV
TVCNRGFEAIRDAGAVIVATSGNHDSAARLGAGAAFSRAGGLHLMTTVSGISAPVVLEDA
HGPVAFYGIPYLEPEITRAQLDVPDARSHAEILDAAMGRVRTDLDARRENAPRTRSVVLA
HAFVVGAEAAGSERSISVGGVETVSASAFGGVDYVALGHLHSPQTLTGNIRYSGSPLPYS
FGERTHGKAVFLVDLDADGLHSVERVDLPVVRGLKQLTGTVQQLLEDDAYRDAEDCYVSA
VLTDPERPVDAMRALQTRFPFAVHLEWQRPDGADDLRYRDKVHGRSDLQITRSFLTDLRS
APSTSEIRLVEAALGYADRAGEDTAEVVALEQTA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcctgcacacttcggactggcacatcggacgcacgttccacggggtggacctg
ctcaccgaccaggcccgtgtgctcgatgcgatcgccgctctcgtcgccgagcacggtgtg
gacgtcgtcgtcgttcccggcgacgtgtacgaccggtcgattcccagcgcggacgccgtc
accgtgtgcaaccgcggattcgaagccatccgggacgcgggcgcggtcatcgtcgccacg
tccggcaaccacgattccgcagcgcggctcggcgcgggtgccgcgttctcccgcgcgggt
gggctgcacctcatgacgacggtctccgggatcagcgcgcccgtcgtgctcgaggacgcg
cacggacccgtcgcgttctacggcatcccgtatctcgagcccgagatcacccgcgcgcaa
ctcgacgtgcctgacgcccggtcgcacgccgagatcctcgacgccgcgatgggccgtgtc
cgcaccgacctggacgcgcgccgtgaaaacgcgccgcgcacccggtcggtggtgctggcc
cacgcgttcgtggtcggggcggaggccgccgggtcggagcggtcgatttccgtcggcggc
gtcgagaccgtgtcggcgtccgctttcggcggggtcgactacgtcgcgctcggccacctc
cactcgccgcagaccctcaccgggaacatccggtactcgggttcgccgctgccgtactcg
ttcggtgagcgcacccacggcaaggccgtcttcctcgtggacctcgacgccgacggactg
cactccgtcgagcgggtcgatctgccggtggtccgcggtctgaagcagctgacggggacg
gtgcagcagttgctcgaggacgacgcgtaccgcgacgccgaggactgctacgtgtcggcg
gtgctcaccgacccggaacgtccggtcgacgccatgcgcgcgctgcagacccggttcccg
ttcgccgtccacctcgaatggcagcgcccggacggtgccgacgatctgcgctaccgcgac
aaggtgcacggacgcagtgatctgcagatcacccgcagcttcctcaccgatctgcgcagc
gcaccgtcgacgagcgagatccggctggtcgaggccgccctcggttacgccgaccgggcc
ggcgaggacaccgccgaggtcgtcgcgctggaacagacggcatga
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