Rhodococcus pseudokoreensis: JWS13_11880
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Entry
JWS13_11880 CDS
T08508
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk00260
Glycine, serine and threonine metabolism
rpsk00460
Cyanoamino acid metabolism
rpsk00630
Glyoxylate and dicarboxylate metabolism
rpsk00670
One carbon pool by folate
rpsk00680
Methane metabolism
rpsk01100
Metabolic pathways
rpsk01110
Biosynthesis of secondary metabolites
rpsk01120
Microbial metabolism in diverse environments
rpsk01200
Carbon metabolism
rpsk01230
Biosynthesis of amino acids
rpsk01240
Biosynthesis of cofactors
rpsk04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JWS13_11880
09102 Energy metabolism
00680 Methane metabolism
JWS13_11880
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JWS13_11880
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JWS13_11880
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JWS13_11880
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JWS13_11880
Enzymes [BR:
rpsk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JWS13_11880
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
SelA
eCIS_core
Motif
Other DBs
NCBI-ProteinID:
QSE89267
UniProt:
A0A974W1Y4
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All DBs
Position
complement(1395245..1396540)
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AA seq
431 aa
AA seq
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MTAVPGTDVNTAPLAELDPEVAQAMAGELARQRDTLEMIASENFVPRAVLQAQGSVLTNK
YAEGYPGRRYYGGCEHVDIVEDLARTRAKELFGADFANVQPHSGAQANAAVLMALMNPGE
KLLGLDLAHGGHLTHGMKLNFSGKLYDVESYGVSKEDHRIDMDEVRKIAVAAQPKVIVAG
WSAYPRHEDFAAFRSIADEVGAYLWVDMAHFAGLVAAGLHPSPVPYADVVSSTVHKTLGG
PRSGLILAKQEWAKKLNSAVFPGQQGGPLMHAIAAKAVSLKIAGTEEFKDRQQRTLSGAK
ILAERLTGSDVVDKGVSVLTGGTDVHLVLVDLRNSQLDGQQGEDLLHEVGITVNRNAVPF
DPRPPMVTSGLRIGTAALASRGFGDEQFTEVADIIGTALAGASDVETLKARVSKLAADFP
LYEGLEDWRLI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgtgcccggtaccgacgtcaacacggcccccctcgccgaactcgaccccgaa
gtcgcccaggccatggcaggtgagctggcccgtcagcgcgacacgctggagatgatcgcg
tcggagaacttcgttccccgcgccgtcctccaggctcagggcagcgtcctcaccaacaag
tacgccgaagggtacccgggacgccggtactacggcggctgcgagcacgtcgacatcgtc
gaggacctcgcccgcacccgggcgaaggaactgttcggcgccgacttcgcgaacgtccag
ccgcactccggcgcgcaggccaacgcagcggtcctgatggccctgatgaacccgggtgag
aagctcctcggtctcgacctggcgcacggcggtcacctcacgcacggcatgaagctgaac
ttctccggcaagctctacgacgtcgagtcgtacggggtcagcaaggaagaccaccgcatc
gacatggacgaggtccgcaagatcgccgtcgccgcgcagccgaaggtcatcgtcgccggc
tggtccgcgtacccgcggcacgaggacttcgccgcgttccggtccatcgccgacgaggtc
ggcgcgtacctgtgggtcgacatggcgcacttcgccggcctggtcgcggccgggctccac
ccgtcgcccgtgccctacgccgacgtcgtgtccagcacagtccacaagacgctcggcgga
ccccgttccggtctgatcctcgccaagcaggagtgggcgaagaagctcaactccgccgtg
ttccccggccagcagggcgggccgctgatgcatgccatcgccgccaaggccgtctccctg
aagatcgcgggcaccgaggagttcaaggaccgtcagcagcgcaccctcagcggcgcgaag
atcctcgccgagcgcctgaccggctcggacgtcgtggacaagggcgtcagcgtcctcacc
ggcggcaccgacgtgcacctcgtgctcgtcgacctgcgcaactcgcagctcgacggccag
cagggtgaggacctcctccacgaggtcggcatcaccgtcaaccgcaacgccgtgccgttc
gacccgcgcccgccgatggtcacgtccggcctccggatcggcaccgccgcgctcgcgtcc
cgcggattcggcgacgagcagttcaccgaggtcgccgacatcatcggcaccgcgctcgcc
ggtgcgtccgacgtcgagacgctgaaggcccgcgtgtcgaagctcgccgccgacttcccg
ctgtacgagggtctcgaggactggcgcctgatctag
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