Rhodococcus pseudokoreensis: JWS13_12960
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Entry
JWS13_12960 CDS
T08508
Name
(GenBank) GGDEF domain-containing protein
Organism
rpsk
Rhodococcus pseudokoreensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
GGDEF_GdpP
GAF_3
Motif
Other DBs
NCBI-ProteinID:
QSE89469
LinkDB
All DBs
Position
complement(1632784..1634628)
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AA seq
614 aa
AA seq
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MNTEKQTEKLDTLVTTVASRLTPVDAVSFKAVATRVLQDLVEHFEVDTSFLRFTDHEIAA
TVLVAEYPLRPFIPDPDPLGVVYFKDADPTFAQIEHQKEVAIFRPEVSGPDYNERVREAS
GVPQVSLAAVPLLSGETTTGTLGFIKFGDRDWTPPELDVLKAIAALLAQVQARIVVEEQL
RYSADHDSLTGLSNRRALYHHLDTRLASTEPGPVAILFLDLDRLKPLNDFFGHGAGDGFI
STIADRLRSTSQADDLVSRLGGDEFVLVLGGSVGLEEAERRAQHIRDVVTERVRLGREVV
SRSVSIGVAAGRPGKATTSSLLSQADQAVMVAKTKGGNAISVFTDEMQEESEKRNMIELS
LRAAIADESLFLEYQPEVDLRTGRIVGVEALVRWNHPLLGLLQPGSFIDVAEATNVAGEL
GRWVIRKACGQWADWRSQAPELDLDLSVNVSPGQLAGLDFLDVVANALTEFDLRKGALCL
EITENAVLSDLTWTREALEGLHAMDVEVAIDDFGTGYSSLSHLKALPVGTLKIDKGFVMN
LDTNPEDRAIVKSIIGLAESFGLELVAEGVENVESARQLLDMGCHRAQGFLFSRPVSAEK
IGKLLAAGAIEVGL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaccgagaagcaaaccgaaaagctcgacaccctggtgacaaccgtggcgtcccgg
ctcacgcctgtcgacgcggtctcgttcaaggccgtggccacccgcgtgctgcaggatctc
gtcgaacacttcgaggtcgacaccagctttctccggttcaccgaccatgagatcgcggcg
acggtcctggtcgcggaatacccccttcggcccttcatccccgaccccgacccactgggc
gtcgtctacttcaaggatgccgatccgacattcgcccagatcgagcaccagaaggaagtc
gcgatcttccggccggaggtgtccggtccggattacaacgaacgggtccgcgaggcgtcg
ggggtgccgcaggtgtcactcgccgccgttccgctgctgtccggtgagacgacgacgggc
acgctcggattcatcaagttcggcgaccgcgactggacgccgccggagctcgacgtcctg
aaggcgattgccgccctgctcgcccaggttcaggcccgcatcgtcgtagaggagcagttg
cgctactcggccgatcacgattccctcaccggactcagcaaccggcgcgccctctaccac
cacctggatacccgcctggcgtcgaccgagcccgggccggttgccattctgttcctggac
ctcgaccgcttgaaacccctcaacgacttcttcggtcacggggcgggcgacgggttcatc
tcgaccattgcggaccggctcagatcgaccagccaggccgacgatctcgtctcgaggctg
ggcggcgacgagttcgttctcgtgctcggaggatcggtgggtctcgaggaggcggagagg
cgggcgcagcacatccgcgacgtcgtgacggaacgggtgcgtctcggccgtgaggtggtc
agccgcagtgtcagcatcggcgtcgccgcggggcgtccgggcaaggccaccacgagttcg
ctcctcagtcaggccgaccaggccgtcatggttgcgaagaccaagggcggaaacgctatc
agcgttttcaccgacgagatgcaggaggagagcgagaagcgcaacatgatcgagctcagt
ctgcgtgcggccatcgcggacgagtcgctgtttctcgagtaccagcccgaggtcgacctg
cggaccggccggatcgtcggggtggaggcactggtgcggtggaatcatccgttgctcggg
ctgctgcagcccggctcgttcatcgacgtcgcggaggcgacgaacgtcgcgggcgaactc
gggcgctgggtcatccggaaggcctgcgggcagtgggccgactggcggtcgcaggcgccc
gagctggatctggatctcagcgtcaatgtctcacccggccagctggccggtctggacttt
ctcgacgtcgtcgcgaacgcgttgacggagttcgaccttcgcaagggcgcactgtgcctg
gagattacggagaacgcagtgctcagtgacctcacgtggacgcgtgaagcgctcgaggga
ctgcacgcgatggacgtggaggtcgcgatcgacgacttcggcaccggatacagctctctc
agtcacctcaaggcactgccggtggggacattgaagatcgacaaggggttcgtgatgaac
ttggataccaatcccgaggaccgggcgattgtgaagtcgatcatcggcctcgcggagtcg
ttcggcctggagttggtggcggagggggtcgagaacgtggagtcggcccggcaacttctg
gacatgggatgtcatcgggcgcagggatttctgttcagccgtcccgtctcggcggagaag
atcggcaagttgctggcggccggagctatcgaggtcgggctgtag
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