Rhodococcus pseudokoreensis: JWS13_13120
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Entry
JWS13_13120 CDS
T08508
Name
(GenBank) IS1380 family transposase
Organism
rpsk
Rhodococcus pseudokoreensis
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_1_4
DDE_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
QSE89498
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All DBs
Position
complement(1665421..1666818)
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AA seq
465 aa
AA seq
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MGKSTSWYPSLSVDPAGTGVVSHAGAVLLLRTAEKTGLTTALSSALEPWRKPTTSHDPGK
IIADLTMALALGGDCLADIALLREEPAVFGRVASDPTVSRLIAALAADAPKALAAINSAR
STARRIAWNAAREQAPDHAIDAGHPLIIDLDATLVTAHSEKENAAATYKRGFGFHPLCAF
VDHGPDGTGEPLAMMLRPGNAGSNTAADHIELIRQALRQLPFTAKGGRVGRKVLIRTDAA
GGTHALIDYLTTQKLSYSIGFGLTDTIVAAIETLPEQAWIPAVDADGQPRDGAWVAEVTG
LLELPGWPDGMRVIVRKERPHPGAQLRFTDRDGLRLTAFVTNTEGGQLPDLELRHRRRAR
CEDRIRILKDTGLENLPLHGFDQNRIWLALVALAVEVTAWMQMLALTDDPASRWEPKRLR
LRLFATAGRIARHARKVHLRLSAHAPWIDLLITALARLNAIPDPL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaagtctacttcgtggtacccgtcgctgtccgttgaccccgccggaaccggtgtc
gtgtcgcacgccggggcggtgttgttgctacgcaccgcagagaaaactggtctgacgacc
gcgttgtcgagtgcgctcgagccgtggcgtaaaccgacgacctcccacgatccgggcaag
atcatcgccgatctgacgatggcactcgccctgggcggcgactgcctggccgatatcgcg
ctgctgcgggaagaacccgcagtcttcggccgggtggcgtccgatcccaccgtctcgaga
ctgattgccgcattggccgctgacgctccgaaagcgttggcggcaatcaactccgcccgt
tcgacagcccgacggatcgcctggaacgccgcccgtgaacaggctcccgaccatgccatc
gacgccggacatccgctgatcatcgacctcgacgccacactggtcaccgcccactcggaa
aaggaaaacgctgccgccacctacaagagagggttcggtttccacccgctgtgcgcgttc
gtcgaccacggaccggacggcacgggcgagccgttggcaatgatgctgcgccccggcaac
gccggctccaacaccgccgcagaccacatcgaactgatacggcaagcattgcggcagttg
ccgttcaccgccaagggcggccgggtcggccgcaaggtactgatccgcaccgacgcggcc
ggcggcacccatgccctcatcgactacctgaccacacagaagttgtcgtactcgatcgga
ttcggtctgaccgacaccatcgtcgccgctatcgaaacccttcccgagcaggcctggatc
cccgccgtggacgcggacgggcaaccacgcgacggcgcctgggtcgccgaagtaaccgga
ctactcgagttgccgggctggcccgacgggatgcgggttatcgtccgcaaagaacgccca
caccccggtgcacaactgcgcttcaccgaccgtgacgggctgcggttgactgcgttcgtc
accaacaccgaaggtggacaattgcccgatctggaactgcggcaccggcgccgggcacgc
tgcgaagaccggatccgcatcctgaaagacaccggcctcgagaaccttccgctgcacggc
ttcgatcagaatcggatctggctcgccctcgtcgccctcgccgtcgaggtcaccgcatgg
atgcagatgctcgcgctcaccgacgacccagccagtcggtgggagccgaaacggctacga
ctacgcctattcgcgaccgccggtcgcatcgcccgtcacgcacggaaggtgcatctgcgg
ctgtccgctcacgcaccctggatcgacttgctgatcaccgcattggcccgtctcaacgca
atccccgaccccctctga
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