Rhodococcus pseudokoreensis: JWS13_13710
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Entry
JWS13_13710 CDS
T08508
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk00020
Citrate cycle (TCA cycle)
rpsk00640
Propanoate metabolism
rpsk00660
C5-Branched dibasic acid metabolism
rpsk00720
Other carbon fixation pathways
rpsk01100
Metabolic pathways
rpsk01110
Biosynthesis of secondary metabolites
rpsk01120
Microbial metabolism in diverse environments
rpsk01200
Carbon metabolism
Module
rpsk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpsk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JWS13_13710 (sucD)
00640 Propanoate metabolism
JWS13_13710 (sucD)
00660 C5-Branched dibasic acid metabolism
JWS13_13710 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
JWS13_13710 (sucD)
Enzymes [BR:
rpsk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
JWS13_13710 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QSE89608
LinkDB
All DBs
Position
complement(1788340..1789242)
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AA seq
300 aa
AA seq
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MAIFLTKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVTHDGGVELPVFG
TVAEAIEKTGADVSIAFVPPAFAKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWAYNVSK
GNKTRIIGPNCPGIITPGESLVGITPANIAGTGPIGLVSKSGTLTYQMMFELRDFGFSTA
IGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANVTKPVVGYVA
GFTAPEGKTMGHAGAIVSGSSGTAQAKKDALEAAGVKVGKTPSETAALAREILQSLTVQA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggctatcttcctgaccaaggactccaaggtcatcgtccagggcatcaccggtggcgag
ggcacgaagcacaccgcgctgatgctcaaggccggcacccaggtcgtcggcggtgtcaac
gcccgtaaggccggcaccaccgtgacccacgacggcggcgtcgagctgcccgtcttcggc
accgttgccgaggccatcgagaagaccggcgcggacgtctccatcgcgttcgttcccccg
gccttcgcgaaggacgccatcgtcgaggccatcgacgcggagatcccgctgctcgtggtc
atcaccgagggcatccccgtgcaggactcggcgtacgcctgggcgtacaacgtctccaag
ggcaacaagacccggatcatcggacccaactgccccggcatcatcacccccggcgagtcg
ctggtcggcatcaccccggccaacatcgcaggcaccggcccgatcggcctcgtgtcgaag
tcgggcacgctgacctaccagatgatgttcgaactgcgtgacttcggcttctccaccgcc
atcggcatcggcggcgacccggtcatcggcaccacccacatcgacgccatcgaggcgttc
gagaaggaccccgagaccaaggtcatcgtgatgatcggtgagatcggcggcgacgccgag
gagcgtgccgccgactacatcaaggcgaacgtcaccaagccggtcgtcggctacgtcgcg
ggcttcaccgcccccgagggcaagaccatgggccacgcaggcgccatcgtctccggttcc
tcgggcaccgcgcaggccaagaaggacgccctcgaggctgccggcgtgaaggtcggcaag
acgccgtccgagaccgctgcgctcgctcgcgagatcctgcagagcctgaccgtccaggcc
tag
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