Rhodococcus pseudokoreensis: JWS13_16510
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Entry
JWS13_16510 CDS
T08508
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk03030
DNA replication
rpsk03430
Mismatch repair
rpsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JWS13_16510
03430 Mismatch repair
JWS13_16510
03440 Homologous recombination
JWS13_16510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpsk03032
]
JWS13_16510
03400 DNA repair and recombination proteins [BR:
rpsk03400
]
JWS13_16510
Enzymes [BR:
rpsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JWS13_16510
DNA replication proteins [BR:
rpsk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JWS13_16510
DNA repair and recombination proteins [BR:
rpsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JWS13_16510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QSE90106
UniProt:
A0A974W2Z1
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All DBs
Position
2427995..2428690
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AA seq
231 aa
AA seq
DB search
MTSWSDRPICAFDLETTGPDPSDARIVSACIAVVDAHHVESRTWLLDPGVAIPQGASDVH
GISTEYARAHGQDYATGYGEIRDALYDAWTRDHAVVAFNASYDLTVMHTEGLRLGLPELV
TGIVVDPYVIDREMDRYRKGRRTLGAVCEYYGIALEDAHEAEADALAAAHLARRLAQEFP
NLRALDIMTHQADWHAERQRDFADYLVRQGRDASDVNGEWPIRGLTPFRIA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctggtcggacagaccgatctgcgcgttcgatctggagacgacggggcccgac
ccctccgacgcccgcatcgtctccgcgtgcatcgccgtcgtcgacgctcaccacgtcgag
tcgcgcacctggttgctcgacccgggggttgccatcccgcagggcgcgtcggacgtgcac
ggaatctccacggagtacgcccgggctcacgggcaggactacgccaccgggtacggcgag
atccgcgacgccctgtacgacgcgtggacccgggaccacgccgtcgtcgcgttcaacgcc
tcctacgacctgaccgtcatgcacaccgagggtctgcggctcgggctgcccgaactcgtc
accggcatcgtcgtcgacccgtacgtcatcgaccgcgagatggaccggtaccggaagggc
aggcgcaccctcggcgcggtgtgcgagtactacggcatcgcactggaggacgcgcacgag
gcggaggccgatgcgctcgccgccgcacacctcgcccggaggctggcgcaggagttcccg
aatctgcgggccctcgacatcatgacccaccaggccgactggcacgcggagcggcagcgc
gacttcgccgactacctcgtccggcaggggcgcgacgcgtcggacgtcaacggcgagtgg
ccgattcgcggcctcaccccgttccgcatcgcctga
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